etomica.virial Class Hierarchy

Class Hierarchy

java.lang.Object
- etomica.virial.AtomPairSet (implements java.io.Serializable)
- etomica.virial.B2ForSphericallySymmetricUByTrapezoidRule
- etomica.virial.B2Ionic
- etomica.virial.B3ForSphericallySymmetricU
- etomica.virial.B3LJ
- etomica.virial.B3NonAddForSphericallySymmetricU
- etomica.virial.B4FFTLJ
- etomica.virial.B5FFTLJ
- etomica.virial.B6FFTLJ
- etomica.virial.BnHNCLJ
- etomica.virial.BnHSIonic
- etomica.virial.BnIETP2Spherical
- etomica.virial.BnJHBVArgon_Analytic
- etomica.virial.BnPCJSDHe
- etomica.virial.BnPY_1QC_Helium
- etomica.virial.BnPYCHe
- etomica.virial.BnPYHardSphere
- etomica.virial.BnPYLJ
- etomica.virial.BnSCALJ
- etomica.box.Box
  - etomica.virial.BoxCluster
- etomica.virial.CalcFFT
- etomica.virial.ClusterBonds (implements java.io.Serializable)
  - etomica.virial.ClusterBondsNonAdditive
- etomica.virial.ClusterChainHS (implements etomica.virial.ClusterAbstract)
- etomica.virial.ClusterChainSoft (implements etomica.virial.ClusterAbstract)
- etomica.virial.ClusterConstant (implements etomica.virial.ClusterAbstract)
- etomica.virial.ClusterCoupledFlipped (implements etomica.virial.ClusterAbstract)
  - etomica.virial.ClusterCoupledAtomFlipped
- etomica.virial.ClusterCoupledFlippedMultivalue (implements etomica.virial.ClusterAbstractMultivalue)
- etomica.virial.ClusterCoupledFlippedPartial (implements etomica.virial.ClusterAbstract)
- etomica.virial.ClusterDifference (implements etomica.virial.ClusterAbstract)
- etomica.virial.ClusterExchange (implements etomica.virial.ClusterAbstract)
- etomica.virial.ClusterMultiToSingle (implements etomica.virial.ClusterAbstract)
- etomica.virial.ClusterMultivalueUmbrella (implements etomica.virial.ClusterWeight)
- etomica.virial.ClusterSinglyConnected (implements etomica.virial.ClusterAbstract)
- etomica.virial.ClusterSum (implements etomica.virial.ClusterAbstract, java.io.Serializable)
  - etomica.virial.ClusterSumAssociation
  - etomica.virial.ClusterSumEF
    - etomica.virial.ClusterSumStickyEF
  - etomica.virial.ClusterSumExternalField
  - etomica.virial.ClusterSumHS (implements etomica.virial.ClusterWheatley)
  - etomica.virial.ClusterSumIC
  - etomica.virial.ClusterSumMultibody
    - etomica.virial.ClusterSumMultibodyShell
  - etomica.virial.ClusterSumShell
- etomica.virial.ClusterSumIC.FR2 (implements etomica.virial.MayerFunction)
- etomica.virial.ClusterSumNonAdditiveTrimerEnergy (implements etomica.virial.ClusterAbstract, java.io.Serializable)
- etomica.virial.ClusterSumPolarizable (implements etomica.virial.ClusterAbstract, java.io.Serializable)
- etomica.virial.ClusterSumPolarizableWertheimProduct (implements etomica.virial.ClusterAbstract, java.io.Serializable)
- etomica.virial.ClusterSumPolarizableWertheimProduct4Pt (implements etomica.virial.ClusterAbstract, java.io.Serializable)
- etomica.virial.ClusterSumPolarizableWertheimProduct4PtFinal (implements etomica.virial.ClusterAbstract, java.io.Serializable)
- etomica.virial.ClusterTree (implements etomica.virial.ClusterAbstract)
  - etomica.virial.ClusterTreeEF
- etomica.virial.ClusterTreeBonds
- etomica.virial.ClusterWeightAbs (implements etomica.virial.ClusterWeight, java.io.Serializable)
- etomica.virial.ClusterWeightSumWall (implements etomica.virial.ClusterWeight)
- etomica.virial.ClusterWeightUmbrella (implements etomica.virial.ClusterWeight, java.io.Serializable)
- etomica.virial.ClusterWheatleyExtendSW (implements etomica.virial.ClusterAbstract)
- etomica.virial.ClusterWheatleyHS (implements etomica.virial.ClusterWheatley)
  - etomica.virial.ClusterICPYC
  - etomica.virial.ClusterPY
  - etomica.virial.ClusterWheatleyHS.AllSigs
- etomica.virial.ClusterWheatleyMultibodyDerivatives.ClusterRetrievePrimes (implements etomica.virial.ClusterAbstract)
- etomica.virial.ClusterWheatleyMultibodyDerivativesBD.ClusterRetrievePrimes (implements etomica.virial.ClusterAbstract)
- etomica.virial.ClusterWheatleyPartitionScreening (implements etomica.virial.ClusterWheatley)
- etomica.virial.ClusterWheatleyPartitionScreening.FrequencyCounter
- etomica.virial.ClusterWheatleyPT (implements etomica.virial.ClusterAbstractMultivalue)
- etomica.virial.ClusterWheatleyPT.ClusterRetrieveOrders (implements etomica.virial.ClusterAbstract)
- etomica.virial.ClusterWheatleyPT.ClusterRetrievePrimesBD (implements etomica.virial.ClusterAbstract)
- etomica.virial.ClusterWheatleySoft (implements etomica.virial.ClusterAbstract)
  - etomica.virial.ClusterWheatleyMultibody
  - etomica.virial.ClusterWheatleySoftMix
    - etomica.virial.ClusterWheatleyMultibodyMix
- etomica.virial.ClusterWheatleySoftBD (implements etomica.virial.ClusterAbstract)
  - etomica.virial.ClusterWheatleyMultibodyBD
  - etomica.virial.ClusterWheatleySoftMixBD
- etomica.virial.ClusterWheatleySoftDerivatives (implements etomica.virial.ClusterAbstract, etomica.virial.ClusterAbstractMultivalue)
  - etomica.virial.ClusterWheatleyMultibodyDerivatives (implements etomica.virial.ClusterAbstractMultivalue)
  - etomica.virial.ClusterWheatleySoftDerivativesMix
- etomica.virial.ClusterWheatleySoftDerivatives.ClusterRetrievePrimes (implements etomica.virial.ClusterAbstract)
- etomica.virial.ClusterWheatleySoftDerivatives.ClusterRetrievePrimesBD (implements etomica.virial.ClusterAbstract)
- etomica.virial.ClusterWheatleySoftDerivativesBD (implements etomica.virial.ClusterAbstract, etomica.virial.ClusterAbstractMultivalue)
  - etomica.virial.ClusterWheatleyMultibodyDerivativesBD (implements etomica.virial.ClusterAbstractMultivalue)
  - etomica.virial.ClusterWheatleySoftDerivativesMixBD
- etomica.virial.ClusterWheatleySoftDerivativesBD.ClusterRetrievePrimes (implements etomica.virial.ClusterAbstract)
- etomica.virial.ConfigurationCluster (implements etomica.config.Configuration, java.io.Serializable)
  - etomica.virial.ConfigurationClusterAceticAcid
  - etomica.virial.ConfigurationClusterChain
  - etomica.virial.ConfigurationClusterChainFourSites
  - etomica.virial.ConfigurationClusterMove
  - etomica.virial.ConfigurationClusterWertheimGCPM
  - etomica.virial.ConfigurationClusterWertheimGCPM4Pt
  - etomica.virial.ConfigurationClusterWertheimGCPMDirectSampling
- etomica.virial.Conformation7SiteRigidSF6 (implements etomica.config.IConformation, java.io.Serializable)
- etomica.virial.ConformationAnthracene3site (implements etomica.config.IConformation, java.io.Serializable)
- etomica.virial.ConformationAnthraceneTraPPE (implements etomica.config.IConformation, java.io.Serializable)
- etomica.virial.ConformationNaphthaleneTraPPE (implements etomica.config.IConformation, java.io.Serializable)
- etomica.virial.ConformationPh3site (implements etomica.config.IConformation, java.io.Serializable)
- etomica.virial.ConformationPhenanthreneTraPPE (implements etomica.config.IConformation, java.io.Serializable)
- etomica.virial.CoordinatePairLeafSet (implements etomica.virial.CoordinatePairSet)
- etomica.virial.CoordinatePairMoleculeSet (implements etomica.virial.CoordinatePairSet)
- etomica.virial.HNCGenerator
- etomica.virial.HypernettedChain
- etomica.virial.IEGenerator
  - etomica.virial.PYGenerator
- etomica.virial.IntSet (implements java.lang.Comparable<T>)
- etomica.virial.IsFFT (implements etomica.graph.property.Property)
- etomica.virial.MayerD2FDT2Spherical (implements etomica.virial.MayerFunction)
- etomica.virial.MayerDFDTSpherical (implements etomica.virial.MayerFunction)
- etomica.virial.MayerDFQFHDTSpherical (implements etomica.virial.MayerFunction)
- etomica.virial.MayerEGeneral (implements etomica.virial.MayerFunction, java.io.Serializable)
- etomica.virial.MayerENonGeneral (implements etomica.virial.MayerFunction, java.io.Serializable)
- etomica.virial.MayerESpherical (implements etomica.virial.MayerFunction)
  - etomica.virial.MayerEHardSphere
- etomica.virial.MayerFunctionNonAdditiveFull (implements etomica.virial.MayerFunctionNonAdditive)
- etomica.virial.MayerFunctionProductGeneral (implements etomica.virial.MayerFunction)
- etomica.virial.MayerFunctionSum (implements etomica.virial.MayerFunction)
- etomica.virial.MayerFunctionSumGeneral (implements etomica.virial.MayerFunction)
- etomica.virial.MayerFunctionTemperature (implements etomica.virial.MayerFunction)
- etomica.virial.MayerFunctionThreeBody (implements etomica.virial.MayerFunctionNonAdditive)
  - etomica.virial.MayerFunctionMolecularThreeBody
  - etomica.virial.MayerFunctionSphericalThreeBody
- etomica.virial.MayerGeneral (implements etomica.virial.MayerFunction)
- etomica.virial.MayerGeneralAtomic (implements etomica.virial.MayerFunction)
- etomica.virial.MayerGeneralSpherical (implements etomica.virial.MayerFunction)
  - etomica.virial.MayerSphericalPlus
- etomica.virial.MayerHardSphere (implements etomica.virial.MayerFunction)
- etomica.virial.MayerHSMixture (implements etomica.virial.MayerFunction)
- etomica.virial.MayerPTAtt (implements etomica.virial.MayerFunction)
- etomica.virial.MayerPUGeneral (implements etomica.virial.MayerFunction, java.io.Serializable)
- etomica.virial.MayerSphericalPTAtt (implements etomica.virial.MayerFunction)
- etomica.virial.MayerSSSeries (implements etomica.virial.MayerFunction)
- etomica.virial.MayerWell (implements etomica.virial.MayerFunction)
- etomica.virial.MayerXSpherical (implements etomica.virial.MayerFunction)
- etomica.integrator.mcmove.MCMove
  - etomica.integrator.mcmove.MCMoveBox
    - etomica.integrator.mcmove.MCMoveBoxStep (implements etomica.integrator.mcmove.MCMoveStepDependent)
      - etomica.integrator.mcmove.MCMoveAtom
        
        etomica.virial.MCMoveClusterAtom
        
        etomica.virial.MCMoveClusterAtomChainHSTail
        
        etomica.virial.MCMoveClusterAtomDiscrete
        
        etomica.virial.MCMoveClusterAtomHSChain
        
        etomica.virial.MCMoveClusterAtomHSChainMix
        
        etomica.virial.MCMoveClusterAtomSQWChain
        
        etomica.virial.MCMoveClusterAtomHSRing
        
        etomica.virial.MCMoveClusterAtomHSTree
        
        etomica.virial.MCMoveClusterAtomHSTreeMix
        
        etomica.virial.MCMoveClusterAtomSQWTree
        
        etomica.virial.MCMoveClusterAtomInBox
        
        etomica.virial.MCMoveClusterAtomMulti
        
        etomica.virial.MCMoveClusterAtomQ
        
        etomica.virial.MCMoveClusterAtomRotateMulti
        
        etomica.virial.MCMoveClusterPolyhedraChain
        
        etomica.virial.MCMoveClusterPolyhedraTree
      - etomica.virial.MCMoveChangeBondLength
      - etomica.virial.MCMoveClusterAngleBend
      - etomica.virial.MCMoveClusterAngleBendAceticAcid
      - etomica.integrator.mcmove.MCMoveMolecule (implements etomica.integrator.mcmove.MCMoveMolecular)
        
        etomica.virial.MCMoveClusterMolecule
        
        etomica.virial.MCMoveClusterMoleculeLayerMove
        
        etomica.virial.MCMoveClusterMoleculeHSChain
        
        etomica.virial.MCMoveClusterMoleculeMulti
        
        etomica.virial.MCMoveClusterRotateCH3
        
        etomica.virial.MCMoveClusterTorsionAceticAcid
        
        etomica.virial.MCMoveClusterTorsionAlkaneEH
        
        etomica.virial.MCMoveClusterTorsionMulti
        
        etomica.virial.MCMoveClusterWiggleAceticAcid
        
        etomica.virial.MCMoveClusterWiggleAlkaneEH
        
        etomica.virial.MCMoveClusterWiggleMulti
        
        etomica.integrator.mcmove.MCMoveRotateMolecule3D
        
        etomica.virial.MCMoveClusterRotateMolecule3D
        
        etomica.virial.MCMoveClusterRotateMoleculeMulti
    - etomica.virial.MCMoveClusterDiagram
    - etomica.virial.MCMoveClusterReptateMulti
    - etomica.virial.MCMoveClusterRingPartialRegrow
    - etomica.virial.MCMoveClusterRingRegrow
    - etomica.virial.MCMoveClusterRingRegrowExchange
    - etomica.virial.MCMoveClusterRingRegrowOrientation
    - etomica.virial.MCMoveClusterRingScale
- etomica.virial.MeterSamplingWeight (implements etomica.data.IDataSource, java.io.Serializable)
- etomica.virial.MeterVirial (implements etomica.data.IDataSource, java.io.Serializable)
- etomica.virial.MeterVirialBD (implements etomica.data.IDataSource)
- etomica.virial.MeterVirialBDBin (implements etomica.action.IAction)
- etomica.virial.MeterVirialBDBinMultiThreaded (implements etomica.action.IAction)
- etomica.virial.MeterVirialBDBinMultiThreaded.MyData
- etomica.virial.MeterVirialBinMultiThreaded (implements etomica.action.IAction)
- etomica.virial.MeterVirialBinMultiThreaded.MyData
- etomica.virial.MeterVirialEBinMultiThreaded (implements etomica.action.IAction)
- etomica.virial.MeterVirialEBinMultiThreaded.MyData
  - etomica.virial.MeterVirialEBinMultiThreaded.MyDataCov
- etomica.virial.MeterVirialExternalField (implements etomica.data.IDataSource, java.io.Serializable)
- etomica.virial.MeterVirialExternalFieldConfined (implements etomica.data.IDataSource, java.io.Serializable)
- etomica.virial.MeterVirialExternalFieldOverlapConfined (implements etomica.virial.ClusterWeightSumWall.DataSourceClusterWall, java.io.Serializable)
- etomica.virial.MeterVirialExternalFieldOverlapConfined.RangeComparator (implements java.util.Comparator<T>)
- etomica.virial.MeterVirialExternalFieldOverlapConfinedRho (implements etomica.virial.ClusterWeightSumWall.DataSourceClusterWall, java.io.Serializable)
- etomica.virial.MeterVirialExternalFieldOverlapConfinedSW (implements etomica.virial.ClusterWeightSumWall.DataSourceClusterWall, java.io.Serializable)
- etomica.virial.MeterVirialExternalFieldOverlapRho (implements etomica.virial.ClusterWeightSumWall.DataSourceClusterWall, java.io.Serializable)
- etomica.virial.MeterVirialExternalFieldRho (implements etomica.data.IDataSource, java.io.Serializable)
- etomica.virial.MeterVirialExternalFieldSW (implements etomica.data.IDataSource, java.io.Serializable)
- etomica.virial.MeterVirialExternalFieldSW.Near (implements java.lang.Comparable<T>)
- etomica.virial.MeterVirialIC (implements etomica.data.IDataSource, java.io.Serializable)
- etomica.virial.MeterVirialSWWE (implements etomica.data.IDataSource)
- etomica.virial.MoleculeActionRelaxWater3P (implements etomica.action.MoleculeAction)
- etomica.virial.MuFGeneral (implements etomica.virial.MayerFunction, java.io.Serializable)
- etomica.virial.MuGeneral (implements etomica.virial.MayerFunction, java.io.Serializable)
- etomica.virial.OrnsteinZernike
- etomica.virial.P1IntraLambda (implements etomica.potential.IPotentialAtomic, etomica.potential.P1IntraMolecular)
- etomica.util.ParameterBase
  - etomica.virial.B3ForSphericallySymmetricU.DampingParams
  - etomica.virial.BnPCJSDHe.BnPCJSDHeParams
  - etomica.virial.BnPYCHe.BnPYHeParams
- etomica.virial.PercusYevick
- etomica.virial.PercusYevick1QC
- etomica.virial.PotentialCommonAtomic (implements etomica.potential.IPotentialAtomic)
- etomica.virial.PotentialGroup3PI.PotentialGroup3PISkip (implements etomica.potential.IPotentialMolecular)
- etomica.virial.PotentialGroupPI.PotentialGroupPISkip (implements etomica.potential.IPotentialMolecular)
- etomica.potential.PotentialMolecular (implements etomica.potential.IPotentialMolecular)
  - etomica.potential.PotentialEmul
    - etomica.virial.PotentialEmulCached
  - etomica.potential.PotentialGroup
    - etomica.virial.PotentialGroup3PI
    - etomica.virial.PotentialGroupPI
- etomica.virial.PotentialNonAdditive (implements etomica.potential.IPotentialMolecular)
- etomica.virial.PotentialNonAdditive.PotentialNonAdditiveNB (implements etomica.potential.IPotentialMolecular)
- etomica.virial.PYGenerator.IteratorEF (implements etomica.graph.model.GraphIterator)
- etomica.virial.Species7SiteRigidSF6
- etomica.virial.SpeciesAlkane
- etomica.virial.SpeciesAnthracene3site464
- etomica.virial.SpeciesAnthracene3site545
- etomica.virial.SpeciesFactorySpheres (implements java.io.Serializable, etomica.virial.SpeciesFactory)
- etomica.virial.SpeciesFactoryWaterGCPM (implements java.io.Serializable, etomica.virial.SpeciesFactory)
- etomica.virial.SpeciesPh3site464
- etomica.virial.SpeciesPh3site545
- etomica.virial.SpeciesTraPPEAnthracene
- etomica.virial.SpeciesTraPPENaphthalene
- etomica.virial.SpeciesTraPPEPhenanthrene

Interface Hierarchy

etomica.virial.ClusterAbstract
- etomica.virial.ClusterAbstractMultivalue
- etomica.virial.ClusterWeight
- etomica.virial.ClusterWheatley
etomica.virial.ClusterSumAssociation.ClusterCriteria
etomica.virial.ClusterWeight.Factory
etomica.virial.CoordinatePairSet
etomica.data.IDataSource
- etomica.virial.ClusterWeightSumWall.DataSourceClusterWall
etomica.virial.IntSet.PropertyBin
etomica.virial.MayerFunction
etomica.virial.MayerFunctionNonAdditive
etomica.virial.SpeciesFactory

Hierarchy For Package etomica.virial

Class Hierarchy

Interface Hierarchy