Package etomica.virial

Class ConfigurationClusterAceticAcid

java.lang.Object

etomica.virial.ConfigurationCluster

etomica.virial.ConfigurationClusterAceticAcid

All Implemented Interfaces:

Configuration

public class ConfigurationClusterAceticAcid
extends ConfigurationCluster

See Also:

Serialized Form

Field Summary

Fields

Modifier and Type	Field	Description
protected MayerFunction	f
protected MayerFunction	f2
protected MayerFunction	f3
protected IRandom	random

Fields inherited from class etomica.virial.ConfigurationCluster

space

Constructor Summary

Constructors

Constructor	Description
ConfigurationClusterAceticAcid(Space _space, IRandom random, MayerFunction f)
ConfigurationClusterAceticAcid(Space _space, IRandom random, MayerFunction f, MayerFunction f2)
ConfigurationClusterAceticAcid(Space _space, IRandom random, MayerFunction f, MayerFunction f2, MayerFunction f3)

Method Summary

Modifier and Type	Method	Description
void	association(MayerFunction f, MoleculePair pair, Box box)
void	initializeCoordinates(Box box, boolean a, boolean b)
void	initializeCoordinates2(Box box, boolean a, boolean b)
void	initializeCoordinates4Mol(Box box, char a, char b, char c, char d, char e, int molNumber, int molNumber2)
void	translation2Mol(int a, double[] e, Box box)
void	translation3Mol(double[] e, double[] f, Box box)
void	translationRandom(IMolecule mol, Box box)

Methods inherited from class etomica.virial.ConfigurationCluster

initializeCoordinates

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

random

protected IRandom random

f

protected MayerFunction f

f2

protected MayerFunction f2

f3

protected MayerFunction f3

Constructor Detail

ConfigurationClusterAceticAcid

public ConfigurationClusterAceticAcid(Space _space,
                                      IRandom random,
                                      MayerFunction f)

ConfigurationClusterAceticAcid

public ConfigurationClusterAceticAcid(Space _space,
                                      IRandom random,
                                      MayerFunction f,
                                      MayerFunction f2)

ConfigurationClusterAceticAcid

public ConfigurationClusterAceticAcid(Space _space,
                                      IRandom random,
                                      MayerFunction f,
                                      MayerFunction f2,
                                      MayerFunction f3)

Method Detail

initializeCoordinates

public void initializeCoordinates(Box box,
                                  boolean a,
                                  boolean b)

initializeCoordinates4Mol

public void initializeCoordinates4Mol(Box box,
                                      char a,
                                      char b,
                                      char c,
                                      char d,
                                      char e,
                                      int molNumber,
                                      int molNumber2)

initializeCoordinates2

public void initializeCoordinates2(Box box,
                                   boolean a,
                                   boolean b)

translation2Mol

public void translation2Mol(int a,
                            double[] e,
                            Box box)

translation3Mol

public void translation3Mol(double[] e,
                            double[] f,
                            Box box)

translationRandom

public void translationRandom(IMolecule mol,
                              Box box)

association

public void association(MayerFunction f,
                        MoleculePair pair,
                        Box box)