Package etomica.util

Class ParameterBase

java.lang.Object

etomica.util.ParameterBase

Direct Known Subclasses:

AshtonWildingLJ.simParams, AshtonWildingOsmoticVirial.simParams, AshtonWildingVirial.simParams, B3ForSphericallySymmetricU.DampingParams, BnFlexibleContributionTraPPEUAMethanol.VirialParam, BnPCJSDHe.BnPCJSDHeParams, BnPYCHe.BnPYHeParams, CH4NVT.Param, ClathrateHarmonicFE.SimParams, ConfigFromFileLAMMPS.ConfigFromFileLAMMPSParam, DHS_NVT.Param, DHS_NVT.Param, DirectSamplingTargetQCArReferenceAzizAr.VirialLJParam, DLJ_NVT_1site.Param, DLJ_NVT_1site.Param, DoubleAssociationSitesFluid2Pt.VirialAssociatingFluidParam, DoubleAssociationSitesFluid3Pt.VirialAssociatingFluidParam, DoubleAssociationSitesFluid4Pt.VirialAssociatingFluidParam, EFSTungsten.Params, FourAssociationSitesFluid2Pt.VirialAssociatingFluidParam, GCRestrictedGibbsHS.simParams, GCWidomInsertHS.simParams, HardSphereSolid.EOSParams, HarmonicCrystalSsFccNxy.Params, Heisenberg.Param, Heisenberg3Pair.Param, HeisenbergPair.Param, HSDimerNPT.HSMD3DParameters, HSMD3D.HSMD3DParam, HSMDCavity.CavityParam, HSMDWidom.HSMDParam, HSNPT.HSMD3DParameters, HTTPSoftSphereApplet.SimOverlapTPSSParams, LJMC.LjMC3DParams, LJMC.LJMCParams, LjMC3D.LjMC3DParams, LJMC3D.SimParams, LJMC3DDimer.SimParams, LJMD.LJMDParams, LjMd3D.LjMd3DParams, LjMd3Dv2y.LjMd3DParams, LJmuVT.LJMCParams, LJNPT.LJMCParams, LJNVT.LJMCParams, LJTSRefLJ.VirialLJParam, LJVacancyMin.SimOverlapParam, MappedU.LJMDParams, MappedVirialLJ.LJMDParams, MappedVirialLJVGr.LJMDParams, MinimizationTIP4P.SimParams, MinimizeHCP.SimOverlapParam, NVTWidomInsertLJ.simParams, P2QChemInterpolated.DampingParams, P3AdditiveQChem.DampingParams, P3QChem.DampingParams, PadeApproximation.VirialParam, PolydisperseHS.HSPolyParam, ProtonDisorderGenerator.SimParams, ReadCluster.ReadClusterParams, ReeHooverMC.VirialParam, SimBennet.SimBennetParam, SimDirectBetaN2RP.SimOverlapParam, SimEinStep1.SimOverlapParam, SimEinStep1HCP.SimOverlapParam, SimEinStep2.SimOverlapParam, SimEinStep2HCP.SimOverlapParam, SimFe.LjMC3DParams, SimGCPMWaterMCNPT.GCPMWaterMCParam, SimGCPMWaterMCNVT.GCPMWaterMCParam, SimGlass.GlassParams, SimHarmonicUmbrella.SimBennetParam, SimHSMDVacancy.HSMDVParams, SimIdealGas.LjMC3DParams, SimLattice.LjMC3DParams, SimLJ.LjMC3DParams, SimLJHTTISuper.SimOverlapParam, SimLJHTTISuperHCP.SimOverlapParam, SimLJHTTISuperHCP2.SimOverlapParam, SimLJHTTISuperSFMD.SimOverlapParam, SimLJVacancy.LJParams, SimMappedRdf.LJMDParams, SimOverlap.SimOverlapParam, SimOverlapAlphaN2TP.SimOverlapParam, SimOverlapBetaN2RP.SimOverlapParam, SimOverlapBetaN2RPScaling.SimOverlapParam, SimOverlapBetaN2TP.SimOverlapParam, SimOverlapDisorderedAlphaN2RPScaling.SimOverlapParam, SimOverlapDisorderedAlphaN2TP.SimOverlapParam, SimOverlapLJ.SimOverlapParam, SimOverlapLJModule.SimOverlapParam, SimOverlapNitrogenModel.SimOverlapParam, SimOverlapSoftSphere.SimOverlapParam, SimOverlapSoftSphereDP.SimOverlapParam, SimOverlapSoftSphereEin.SimOverlapParam, SimOverlapSoftSphereEinHarm.SimOverlapParam, SimOverlapSoftSphereHCP.SimOverlapParam, SimOverlapSoftSphereReweighting.SimOverlapParam, SimOverlapSoftSphereSoftness.SimOverlapParam, SimOverlapSoftSphereSuperBox.SimOverlapParam, SimOverlapSoftSphereTP.SimOverlapParam, SimOverlapSoftSphereTPHCP.SimOverlapParam, SimOverlapSoftSphereTPSlantedBox.SimOverlapParam, SimOverlapSSnxy.SimOverlapParam, SimTargetUmbrella.SimBennetParam, SimUmbrella.SimBennetParam, SimUmbrellaSoftSphere.SimBennetParam, SingleAssociationSiteFluid.VirialAssociatingFluidParam, SingleAssociationSiteFluid2.VirialAssociatingFluidParam, SingleAssociationSiteFluid2Pt.VirialAssociatingFluidParam, SingleAssociationSiteFluid3Pt.VirialAssociatingFluidParam, SingleAssociationSiteFluid4Points.VirialAssociatingFluidParam, SingleAssociationSiteFluid4Pt.VirialAssociatingFluidParam, SingleAssociationSiteFluidGraph.VirialAssociatingFluidParam, StarPolymerMC.PolymerParam, StarPolymerMD.PolymerParam, StatisticsMCGraphic.StatsParams, TestAceticAcidMC3D_NPT.AceticAcidMCParam, TestHSMD3D.SimParams, TestIGAssociationMC3D_NPT_DoubleSites.VirialAssociatingFluidParam, TestLJAssociationMC3D_NPT_DoubleSites.VirialAssociatingFluidParam, TestLJAssociationMC3D_NPT.VirialAssociatingFluidParam, TestLJAssociationMC3D_NPT.VirialAssociatingFluidParam, TestLJAssociationMC3D_NVTOld.VirialAssociatingFluidParam, TestLJGCMC3D.SimParams, TestLJMC3D.SimParams, TestLJMD3D.SimParams, TestSWChain.SimParams, TIP4P_NVT.Param, Virial2CLJmuQ.Virial2CLJQParam, Virial2CLJQ.Virial2CLJQParam, Virial7SiteRigidSF6.VirialSF6Param, VirialAceticAcid.VirialParam, VirialAceticAcidFlex.VirialParam, VirialAlkane.VirialSiepmannSpheresParam, VirialAlkaneEHTest.VirialParam, VirialAlkaneFlex.VirialSiepmannSpheresParam, VirialAlkaneFull.VirialSiepmannSpheresParam, VirialAlkaneMix_Kong.VirialAlkaneMixParam, VirialAlkaneMix.VirialAlkaneMixParam, VirialAlkaneMix2_Kong.VirialAlkaneMixParam, VirialAlkaneMix2.VirialAlkaneMixParam, VirialAlkaneSKS.VirialSiepmannSpheresParam, VirialAnthracene464.VirialAnthracene545Param, VirialAnthracene545.VirialAnthracene545Param, VirialAnthraceneTraPPE.VirialAnthraceneTraPPEParam, VirialAssociatingFluid.VirialAssociatingFluidParam, VirialAssociatingFluid4points.VirialAssociatingFluidParam, VirialB2WaterTIP4P_DHS_difference.VirialParam, VirialB3C1HSDipole.VirialParam, VirialB3C1TIP4Pwater.VirialParam, VirialB3C2HSDipole.VirialParam, VirialB3C2TIP4Pwater.VirialParam, VirialCH4AlkaneEHMix.VirialMixParam, VirialCO2.VirialCO2Param, VirialCO2AlkaneEHMix.VirialMixParam, VirialCO2AlkaneUAMix.VirialMixParam, VirialCO2anthracene464.VirialCO2anthracene545Param, VirialCO2anthracene545.VirialCO2anthracene545Param, VirialCO2AnthraceneTraPPE.VirialCO2AnthraceneTraPPEParam, VirialCO2CH4Mix.VirialMixParam, VirialCO2CH4UAMix.VirialMixParam, VirialCO2CH4UAMixWheatley.VirialMixParam, VirialCO2H2OGCPM.VirialParam, VirialCO2H2OGCPMX.VirialParam, VirialCO2H2OSC.VirialCO2SCParam, VirialCO2LJQ.VirialCO2LJQParam, VirialCO2N2Mix.VirialMixParam, VirialCO2NaphthaleneLJQ.VirialCO2NaphthaleneLJQParam, VirialCO2NaphthaleneTraPPE.VirialCO2TraPPEParam, VirialCO2PI.VirialH2PIParam, VirialCO2SKSMix.VirialCO2Param, VirialCO2TraPPE.VirialCO2TraPPEParam, VirialCPSHeliumNonAdditive.VirialParam, VirialCPSHeliumNonAdditiveClassical_Correction.VirialParam, VirialCPSHeliumNonAdditiveClassical.VirialParam, VirialEmulNonAdditive.VirialParam, VirialExternalFieldConfinedOverlap.VirialExternalFieldParam, VirialExternalFieldConfinedOverlapRho.VirialExternalFieldParam, VirialExternalFieldConfinedOverlapSW.VirialExternalFieldParam, VirialExternalFieldOverlapRho.VirialExternalFieldParam, VirialGCPM.VirialGCPMParam, VirialH2O.VirialH2OParam, VirialH2OGCPMD.VirialParam, VirialH2PI.VirialH2PIParam, VirialH2PIBoltzmann.VirialHePIParam, VirialH2PISimple.VirialH2PISimpleParam, VirialH2PIXC.VirialHePIParam, VirialH2PYCorrection.VirialH2PYCParam, VirialHardAssociationCone.VirialLJParam, VirialHardAssociationConeDoubleSites.VirialLJParam, VirialHeD.VirialParam, VirialHeNonAdditive.VirialParam, VirialHeNonAdditiveD.VirialParam, VirialHeNonAdditiveWheatley.VirialParam, VirialHePCKLJS.VirialParam, VirialHePCKLJSCHNCCorrection.VirialLJParam, VirialHePCKLJSPYCorrection.VirialLJParam, VirialHePCKLJSTempDeriv.VirialParam, VirialHePI_PotentialCorrection.VirialHePIParam, VirialHePI.VirialHePIParam, VirialHePISysErr.VirialHePIParam, VirialHePIXC.VirialHePIParam, VirialHePIXCEven.VirialHePIParam, VirialHePIXCOdd.VirialHePIParam, VirialHePYCorrection.VirialHePYCParam, VirialHeSC.VirialHePYCParam, VirialHS.VirialHSParam, VirialHSBinMultiThreaded.VirialHSBinParam, VirialHSMixture.VirialHSParam, VirialHSMixtureOverlap.VirialHSParam, VirialHSOrC.VirialLJrParam, VirialLJ.VirialLJParam, VirialLJBridge.VirialLJParam, VirialLJCHNCCorrection.VirialLJParam, VirialLJD.VirialLJParam, VirialLJDU.VirialLJParam, VirialLJMultiOverlap.VirialMixParam, VirialLJOrC.VirialLJrParam, VirialLJOrICPYC.VirialLJrParam, VirialLJPT.VirialLJParam, VirialLJPYCorrection.VirialLJParam, VirialLJSeries.VirialLJParam, VirialMethaneEH.VirialMethaneParam, VirialN2.VirialN2Param, VirialN2AlkaneEHMix.VirialMixParam, VirialN2AlkaneUAMix.VirialMixParam, VirialN2AlkaneUARigid.VirialMixParam, VirialN2CH4Mix.VirialMixParam, VirialN2CH4UAMix.VirialMixParam, VirialN2PI.VirialN2Param, VirialN2TraPPE.VirialN2Param, VirialNaphthaleneTraPPE.VirialNaphthaleneTraPPEParam, VirialO2.VirialO2Param, VirialO2PI.VirialO2Param, VirialOptimizer.VirialParam, VirialPh464.VirialPh3site464Param, VirialPh545.VirialPh3site545Param, VirialPhenanthreneTraPPE.VirialPhenanthreneTraPPEParam, VirialPolyhedra.VirialHSParam, VirialPolyhedra2.VirialHSParam, VirialPolymerOverlapMC.VirialHSParam, VirialPolymerOverlapWithMD.VirialHSParam, VirialPolymerOverlapWithMDB3.VirialHSParam, VirialRowleyAlcohol.VirialParam, VirialSF6LJAlkaneUAMix.VirialMixParam, VirialSQWBinMultiRecalcW.VirialHSParam, VirialSQWBinMultiThreaded.VirialHSBinParam, VirialSQWRecalcSmallMem.VirialHSParam, VirialSW.VirialSWParam, VirialSwsPT.VirialSiepmannSpheresParam, VirialSWWE.VirialSWWEParam, VirialTraPPE.VirialParam, VirialTraPPEAlcohol.VirialParam, VLESim.GEMCParams, Wertheim2SiteAceticAcid.WertheimParam, WertheimGCPM3PtEBondDecomp.VirialAssociatingFluidParam, WertheimGCPM3PtThreeSite.VirialAssociatingFluidParam, WertheimGCPM4PtEBondDecomp.WertheimAssociatingFluidParam, WertheimGCPM4PtEBondDecompFinal.VirialAssociatingFluidParam, WertheimGCPM4PtThreeSite.VirialAssociatingFluidParam, WertheimGCPM4PtThreeSiteEDecompDirectSampling.VirialAssociatingFluidParam

public abstract class ParameterBase
extends java.lang.Object

Base class for all parameter wrapper implementations. Subclasses should simply contain fields corresponding to each parameter. If any parameters are more complex than can be handled by this class, ParamParsers should be added to this object.

Field Summary

Fields

Modifier and Type	Field	Description
protected ParameterParser[]	parsers

Constructor Summary

Constructors

Constructor	Description
ParameterBase()

Method Summary

Modifier and Type	Method	Description
void	addParser(ParameterParser newParser)
ParameterParser[]	getParsers()
java.lang.String	getValueString(java.lang.reflect.Field field)	Actually writes field name and value to a file using fileWriter.
void	removeParser(ParameterParser oldParser)
void	setValue(java.lang.reflect.Field field, java.lang.String value)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

parsers

protected ParameterParser[] parsers

Constructor Detail

ParameterBase

public ParameterBase()

Method Detail

addParser

public void addParser(ParameterParser newParser)

removeParser

public void removeParser(ParameterParser oldParser)

getParsers

public ParameterParser[] getParsers()

setValue

public final void setValue(java.lang.reflect.Field field,
                           java.lang.String value)

getValueString

public final java.lang.String getValueString(java.lang.reflect.Field field)

Actually writes field name and value to a file using fileWriter. If the type of field is unrecognized, the wrapper object itself will be asked to write the field.