Package etomica.virial

Class CoordinatePairLeafSet

java.lang.Object

etomica.virial.CoordinatePairLeafSet

All Implemented Interfaces:

CoordinatePairSet

public class CoordinatePairLeafSet
extends java.lang.Object
implements CoordinatePairSet

Field Summary

Fields

Modifier and Type	Field	Description
protected Vector	dr
protected long	ID
protected int	numAtoms
protected Vector[]	positions
protected double[]	r2

Constructor Summary

Constructors

Constructor	Description
CoordinatePairLeafSet(IAtomList list, Space space)	Constructor for CoordinatePairLeafSet.

Method Summary

Modifier and Type	Method	Description
void	E(CoordinatePairLeafSet c)
long	getID()
double	getr2(int i, int j)	Returns atom pair for ith and jth atoms in set.
void	reset(long cPairID)	Informs the CoordinatePairSet that the configuration has changed and that it has a new ID

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

r2

protected final double[] r2

positions

protected final Vector[] positions

numAtoms

protected final int numAtoms

dr

protected final Vector dr

ID

protected long ID

Constructor Detail

CoordinatePairLeafSet

public CoordinatePairLeafSet(IAtomList list,
                             Space space)

Constructor for CoordinatePairLeafSet.

Parameters:

list - The list of atoms for which the set of pairs is formed.

Method Detail

getr2

public double getr2(int i,
                    int j)

Returns atom pair for ith and jth atoms in set.

Specified by:

getr2 in interface CoordinatePairSet

reset

public void reset(long cPairID)

Description copied from interface: CoordinatePairSet

Informs the CoordinatePairSet that the configuration has changed and that it has a new ID

Specified by:

reset in interface CoordinatePairSet

E

public void E(CoordinatePairLeafSet c)

getID

public long getID()

Specified by:

getID in interface CoordinatePairSet