Hierarchy For Package etomica.association

Package Hierarchies:

• All Packages

Class Hierarchy

• java.lang.Object
  • etomica.association.AssociationHelperBranched (implements etomica.association.IAssociationHelper)
  • etomica.association.AssociationHelperDouble (implements etomica.association.IAssociationHelper)
  • etomica.association.AssociationHelperMolecule (implements etomica.association.IAssociationHelperMolecule)
  • etomica.association.AssociationHelperSingle (implements etomica.association.IAssociationHelper)
  • etomica.association.AssociationManager (implements etomica.atom.AtomLeafAgentManager.AgentSource<E>, etomica.util.IListener<E>)
  • etomica.association.AssociationManagerMolecule (implements etomica.util.IListener<E>, etomica.molecule.MoleculeAgentManager.MoleculeAgentSource<E>)
  • etomica.association.AtomSourceRandomDimer (implements etomica.atom.AtomSource)
  • etomica.atom.AtomSourceRandomLeaf (implements etomica.atom.AtomSource, java.io.Serializable)
    • etomica.association.AtomSourceRandomMonomer
  • etomica.association.AtomSourceRandomSmer (implements etomica.atom.AtomSource)
  • etomica.association.BiasVolume (implements etomica.association.AssociationDefinition, java.io.Serializable)
    • etomica.association.BiasVolumeCube
    • etomica.association.BiasVolumeSphere
    • etomica.association.BiasVolumeSphereOriented
    • etomica.association.BiasVolumeSphereOrientedDoubleSites
  • etomica.association.BiasVolume2SiteAceticAcid (implements etomica.association.AssociationDefinitionMolecule)
  • etomica.association.BiasVolumeMolecule (implements etomica.association.AssociationDefinitionMolecule, java.io.Serializable)
    • etomica.association.BiasVolumeAceticAcid
  • etomica.graphics.ColorScheme
    • etomica.association.ColorSchemeSmer (implements etomica.atom.AtomLeafAgentManager.AgentSource<E>)
    • etomica.association.ColorSchemeSmerByLength
  • etomica.association.ColorSchemeSmer.ColorAgent
  • etomica.data.DataSourceScalar (implements etomica.data.IDataSource)
    • etomica.association.MeterDimerMoleFraction
  • etomica.integrator.mcmove.MCMove
    • etomica.integrator.mcmove.MCMoveBox
      • etomica.association.MCMoveBiasUB
      • etomica.association.MCMoveBiasUBMolecule (implements etomica.integrator.mcmove.MCMoveMolecular)
      • etomica.integrator.mcmove.MCMoveBoxStep (implements etomica.integrator.mcmove.MCMoveStepDependent)
        • etomica.integrator.mcmove.MCMoveAtom
          • etomica.association.MCMoveAtomDimer
          • etomica.association.MCMoveAtomMonomer
          • etomica.association.MCMoveAtomNoSmer
          • etomica.association.MCMoveAtomSmer
          • etomica.integrator.mcmove.MCMoveRotate
            • etomica.association.MCMoveRotateNoSmer
          • etomica.association.MCMoveRotateAssociated
        • etomica.association.MCMoveDimer
        • etomica.association.MCMoveDimerRotate
        • etomica.integrator.mcmove.MCMoveMolecule (implements etomica.integrator.mcmove.MCMoveMolecular)
          • etomica.association.MCMoveMoleculeMonomer
          • etomica.association.MCMoveMoleculeSmer
          • etomica.integrator.mcmove.MCMoveRotateMolecule3D
            • etomica.association.MCMoveMoleculeRotateAssociated
        • etomica.association.MCMoveSmer
        • etomica.association.MCMoveSmerRotate
        • etomica.association.MCMoveVolumeAssociated (implements etomica.atom.AtomLeafAgentManager.AgentSource<E>)
        • etomica.association.MCMoveVolumeAssociatedMolecule (implements etomica.integrator.mcmove.MCMoveMolecular, etomica.molecule.MoleculeAgentManager.MoleculeAgentSource<E>)
  • etomica.association.MCMoveVolumeAssociated.Agent
  • etomica.association.MCMoveVolumeAssociatedMolecule.Agent
  • etomica.association.MoleculeSourceRandomDimer (implements etomica.molecule.MoleculeSource)
  • etomica.molecule.MoleculeSourceRandomMolecule (implements etomica.molecule.MoleculeSource, java.io.Serializable)
    • etomica.association.MoleculeSourceRandomMonomer
  • etomica.util.ParameterBase
    • etomica.association.TestIGAssociationMC3D_NPT_DoubleSites.VirialAssociatingFluidParam
    • etomica.association.TestLJAssociationMC3D_NPT_DoubleSites.VirialAssociatingFluidParam
    • etomica.association.TestLJAssociationMC3D_NPT.VirialAssociatingFluidParam
    • etomica.association.TestLJAssociationMC3D_NVTOld.VirialAssociatingFluidParam
  • etomica.simulation.Simulation
    • etomica.association.TestIGAssociationMC3D_NPT_DoubleSites
    • etomica.association.TestLJAssociationMC3D_NPT
    • etomica.association.TestLJAssociationMC3D_NPT_DoubleSites
    • etomica.association.TestLJAssociationMC3D_NVTOld

Interface Hierarchy

• etomica.association.AssociationDefinition
• etomica.association.AssociationDefinitionMolecule
• etomica.association.IAssociationHelper
• etomica.association.IAssociationHelperMolecule