Hierarchy For Package etomica.models.nitrogen

Package Hierarchies:

• All Packages

Class Hierarchy

• java.lang.Object
  • etomica.models.nitrogen.AtomActionTransformed (implements etomica.action.AtomAction)
  • etomica.models.nitrogen.BetaPhaseLatticeParameter
  • etomica.models.nitrogen.BetaPhaseLatticeParameterLS
  • etomica.models.nitrogen.BetaPhaseLatticeParameterNA
  • etomica.space.Boundary
    • etomica.space.BoundaryDeformablePeriodic
      • etomica.models.nitrogen.BoundaryDeformablePeriodicSwitch
    • etomica.space.BoundaryRectangular
      • etomica.space.BoundaryRectangularPeriodic
        • etomica.models.nitrogen.BoundaryRectangularPeriodicSwitch
  • etomica.models.nitrogen.CalcAnalytical2ndDerivativeNitrogen
  • etomica.models.nitrogen.CalcHalfAnalyticHalfNumeric2ndDerivativeNitrogen
  • etomica.models.nitrogen.CalcNumerical2ndDerivative
  • etomica.models.nitrogen.CalcNumerical2ndDerivativeNitrogen
  • etomica.models.nitrogen.ConformationNitrogen (implements etomica.config.IConformation, java.io.Serializable)
  • etomica.models.nitrogen.ConformationNitrogenShellModel (implements etomica.config.IConformation, java.io.Serializable)
  • etomica.normalmode.CoordinateDefinition
    • etomica.normalmode.CoordinateDefinitionMolecule (implements java.io.Serializable)
      • etomica.models.nitrogen.CoordinateDefinitionNitrogen (implements java.io.Serializable)
      • etomica.models.nitrogen.CoordinateDefinitionNitrogenSuperBox (implements java.io.Serializable)
  • etomica.models.nitrogen.CoordinateDefinitionNitrogen.OrientationAgentSource (implements etomica.molecule.MoleculeAgentManager.MoleculeAgentSource<E>, java.io.Serializable)
  • etomica.models.nitrogen.CoordinateDefinitionNitrogenSuperBox.OrientationAgentSource (implements etomica.molecule.MoleculeAgentManager.MoleculeAgentSource<E>, java.io.Serializable)
  • etomica.data.types.DataGroup (implements etomica.data.IData, java.io.Serializable)
    • etomica.models.nitrogen.LatticeSumCrystalMolecular.DataGroupLSC
  • etomica.data.DataSourceScalar (implements etomica.data.IDataSource)
    • etomica.models.nitrogen.MeterBoltzmannDirect
    • etomica.models.nitrogen.MeterDirectInitPert
    • etomica.models.nitrogen.MeterOrientationOrderParameter
    • etomica.models.nitrogen.MeterRotPerturbMolecule
  • etomica.models.nitrogen.FindPairMoleculeIndex
  • etomica.models.nitrogen.FindPairMoleculeIndexBetaN2
  • etomica.models.nitrogen.FindTransitionTemperature
  • etomica.models.nitrogen.FiniteDifferenceDerivativeCGNitrogenBeta
  • etomica.models.nitrogen.LatticeSumCrystalMolecular
  • etomica.integrator.mcmove.MCMove
    • etomica.integrator.mcmove.MCMoveBox
      • etomica.integrator.mcmove.MCMoveBoxStep (implements etomica.integrator.mcmove.MCMoveStepDependent)
        • etomica.integrator.mcmove.MCMoveMolecule (implements etomica.integrator.mcmove.MCMoveMolecular)
          • etomica.models.nitrogen.MCMoveRotateMolecule3DConstraint
          • etomica.models.nitrogen.MCMoveRotateMolecule3DFixedAngle
          • etomica.models.nitrogen.MCMoveRotateMolecule3DN2AveCosThetaConstraint
          • etomica.models.nitrogen.MCMoveRotateMolecule3DSuperBox (implements etomica.integrator.mcmove.MCMoveMolecular)
        • etomica.models.nitrogen.MCMoveMoleculeCoupledInitPert
        • etomica.models.nitrogen.MCMoveMoleculeCoupledSuperBox (implements etomica.integrator.mcmove.MCMoveMolecular)
        • etomica.models.nitrogen.MCMoveVolumeN2
  • etomica.models.nitrogen.MeterBoltzmann (implements etomica.data.IDataSource)
  • etomica.models.nitrogen.MeterBoltzmannRotPerturb (implements etomica.data.IDataSource)
  • etomica.models.nitrogen.MeterNormalizedCoord (implements etomica.action.IAction, etomica.data.IDataSource, java.io.Serializable)
  • etomica.models.nitrogen.MeterNormalizedCoordBeta (implements etomica.action.IAction, etomica.data.IDataSource, java.io.Serializable)
  • etomica.models.nitrogen.MeterOrientationDistribution (implements etomica.action.IAction, etomica.data.IDataSource, java.io.Serializable)
  • etomica.models.nitrogen.MeterRotationDistributionGroup (implements etomica.action.IAction, etomica.data.IDataSource, java.io.Serializable)
  • etomica.models.nitrogen.MeterTargetRPMolecule (implements etomica.data.IDataSource)
  • etomica.models.nitrogen.MeterTargetTPMolecule (implements etomica.data.IDataSource)
  • etomica.util.ParameterBase
    • etomica.models.nitrogen.SimDirectBetaN2RP.SimOverlapParam
    • etomica.models.nitrogen.SimOverlapAlphaN2TP.SimOverlapParam
    • etomica.models.nitrogen.SimOverlapBetaN2RP.SimOverlapParam
    • etomica.models.nitrogen.SimOverlapBetaN2RPScaling.SimOverlapParam
    • etomica.models.nitrogen.SimOverlapBetaN2TP.SimOverlapParam
    • etomica.models.nitrogen.SimOverlapDisorderedAlphaN2RPScaling.SimOverlapParam
    • etomica.models.nitrogen.SimOverlapDisorderedAlphaN2TP.SimOverlapParam
    • etomica.models.nitrogen.SimOverlapNitrogenModel.SimOverlapParam
  • etomica.potential.PotentialMolecular (implements etomica.potential.IPotentialMolecular)
    • etomica.models.nitrogen.P0LatticeEnergyCorrec
    • etomica.models.nitrogen.P2Nitrogen (implements etomica.potential.IPotentialMolecularTorque)
    • etomica.models.nitrogen.P2NitrogenAB (implements etomica.potential.PotentialMolecularSoft)
    • etomica.models.nitrogen.P2NitrogenAnisotropic
    • etomica.models.nitrogen.P2NitrogenShellModel (implements etomica.potential.PotentialMolecularSoft)
    • etomica.models.nitrogen.PRotConstraint
  • etomica.simulation.Simulation
    • etomica.models.nitrogen.FindBetaN2AngleFromParameter
    • etomica.models.nitrogen.HarmonicAlphaNitrogenModel
    • etomica.models.nitrogen.HarmonicAlphaNitrogenModelDecomposed
    • etomica.models.nitrogen.HarmonicAlphaNitrogenModelLatticeSum
    • etomica.models.nitrogen.HarmonicAlphaNitrogenModelPairMolecule
    • etomica.models.nitrogen.HarmonicAlphaNitrogenModelPairMoleculeSequential
    • etomica.models.nitrogen.HarmonicAlphaNitrogenModelPairMoleculeSequentialHalf2
    • etomica.models.nitrogen.HarmonicAlphaNitrogenModelPairMoleculeSequentialHalf2LS
    • etomica.models.nitrogen.HarmonicAlphaNitrogenModelPairMoleculeSequentialLS
    • etomica.models.nitrogen.HarmonicBetaNitrogenModel
    • etomica.models.nitrogen.HarmonicBetaNitrogenModelDecomposed
    • etomica.models.nitrogen.HarmonicBetaNitrogenModelLatticeSum
    • etomica.models.nitrogen.HarmonicBetaNitrogenModelPairMoleculeSequential
    • etomica.models.nitrogen.HarmonicBetaNitrogenModelPairMoleculeSequential5dofLS
    • etomica.models.nitrogen.HarmonicBetaNitrogenModelPairMoleculeSequentialHalf2
    • etomica.models.nitrogen.HarmonicBetaNitrogenModelPairMoleculeSequentialHalf2LS
    • etomica.models.nitrogen.HarmonicBetaNitrogenModelPairMoleculeSequentialLS
    • etomica.models.nitrogen.HarmonicDisorderedAlphaNitrogenModelPairMoleculeSequentialHalf2LS
    • etomica.models.nitrogen.HarmonicDisorderedAlphaNitrogenModelPairMoleculeSequentialLS
    • etomica.models.nitrogen.MinimizationBetaNitrogenModel
    • etomica.models.nitrogen.MinimizationBetaNitrogenModelLS
    • etomica.models.nitrogen.MinimizeBetaNitrogenLatticeParameter
    • etomica.models.nitrogen.MinimizeBetaNitrogenLatticeParameterFromFile
    • etomica.models.nitrogen.MinimizeBetaNitrogenLatticeParameterLSFromFile
    • etomica.models.nitrogen.MinimizeBetaNitrogenTranslationDOF
    • etomica.models.nitrogen.MinimizeGammaNitrogenLatticeParameter
    • etomica.models.nitrogen.SimDirectBetaN2RP
    • etomica.models.nitrogen.SimDirectBetaN2RPAngleToNoAngle
    • etomica.models.nitrogen.SimDirectBetaN2RPInitPert
    • etomica.models.nitrogen.SimDirectDisorderedAlphaN2RPInitPert
    • etomica.models.nitrogen.SimOverlapAlphaN2TP
    • etomica.models.nitrogen.SimOverlapBetaN2RP
    • etomica.models.nitrogen.SimOverlapBetaN2RPScaling
    • etomica.models.nitrogen.SimOverlapBetaN2TP
    • etomica.models.nitrogen.SimOverlapDisorderedAlphaN2RPScaling
    • etomica.models.nitrogen.SimOverlapDisorderedAlphaN2TP
    • etomica.models.nitrogen.SimOverlapNitrogenModel
    • etomica.models.nitrogen.SimulationAlphaNitrogenModel
    • etomica.models.nitrogen.SimulationBetaNitrogenModel
    • etomica.models.nitrogen.SimulationBetaNitrogenModelTest
    • etomica.models.nitrogen.SimulationGammaNitrogenModel
  • etomica.models.nitrogen.SpeciesN2
  • etomica.models.nitrogen.SpeciesN2ShellModel
  • etomica.models.nitrogen.TestRotationVector