Package etomica.models.nitrogen

Class MeterNormalizedCoordBeta

java.lang.Object

etomica.models.nitrogen.MeterNormalizedCoordBeta

All Implemented Interfaces:

IAction, IDataSource, java.io.Serializable

public class MeterNormalizedCoordBeta
extends java.lang.Object
implements IDataSource, IAction, java.io.Serializable

Sample the distribution of the normalized coordinate for the atoms/ molecules from coordinate definition, calcU method. They are the quantities of deviation in translation and rotation from the atomic/molecular nominal position and orientation Specific class to sample the distribution of the translational dof of beta-N2 with 2 molecules in a unit cell and there are 2 distinct unit cells. So the total number of parameter that we sample for the system is 3 x 2 x 2 = 12.

See Also:

Serialized Form

Field Summary

Fields

Modifier and Type	Field	Description
protected CoordinateDefinition	coordinateDefinition

Constructor Summary

Constructors

Constructor	Description
MeterNormalizedCoordBeta(Box newBox, CoordinateDefinition coordDef, ISpecies species)

Method Summary

Modifier and Type	Method	Description
void	actionPerformed()	Assigning the histogram to data
IData	getData()	Returns the DataGroup of uDistribtion[i]
IDataInfo	getDataInfo()
DataTag	getTag()
void	reset()	Sets the tensor summation to 0.
void	writeUdistribution(java.lang.String filename)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

coordinateDefinition

protected CoordinateDefinition coordinateDefinition

Constructor Detail

MeterNormalizedCoordBeta

public MeterNormalizedCoordBeta(Box newBox,
                                CoordinateDefinition coordDef,
                                ISpecies species)

Method Detail

getDataInfo

public IDataInfo getDataInfo()

Specified by:

getDataInfo in interface IDataSource

actionPerformed

public void actionPerformed()

Assigning the histogram to data

Specified by:

actionPerformed in interface IAction

getData

public IData getData()

Returns the DataGroup of uDistribtion[i]

Specified by:

getData in interface IDataSource

Returns:

the data given by this source

reset

public void reset()

Sets the tensor summation to 0.

getTag

public DataTag getTag()

Specified by:

getTag in interface IDataSource

Returns:

a tag that uniquely identifies the IDataInfo

writeUdistribution

public void writeUdistribution(java.lang.String filename)