Package etomica.nbr.list.molecule

Class NeighborCellManagerListMolecular

java.lang.Object

etomica.nbr.cell.molecule.NeighborCellManagerMolecular

etomica.nbr.list.molecule.NeighborCellManagerListMolecular

All Implemented Interfaces:

BoxCellManager, MoleculeAgentManager.MoleculeAgentSource, BoundaryEventListener

public class NeighborCellManagerListMolecular
extends NeighborCellManagerMolecular

Subclass of NeighborCellManager that notifies the NeighborListManager when an atom added to the box gets a cell.

See Also:

Serialized Form

Field Summary

Fields

Modifier and Type	Field	Description
protected PotentialMasterListMolecular	potentialMaster

Fields inherited from class etomica.nbr.cell.molecule.NeighborCellManagerMolecular

agentManager, box, cellRange, doApplyPBC, lattice, moleculeSite, numCells, positionDefinition, range, sim, space, v

Constructor Summary

Constructors

Constructor	Description
NeighborCellManagerListMolecular(Simulation sim, Box box, double potentialRange, IMoleculePositionDefinition positionDefinition, Space _space)
NeighborCellManagerListMolecular(Simulation sim, Box box, double potentialRange, Space _space)

Method Summary

Modifier and Type	Method	Description
java.lang.Object	makeAgent(IMolecule molecule)	Returns the cell containing the given atom.
void	setPotentialMaster(PotentialMasterListMolecular newPotentialMaster)

Methods inherited from class etomica.nbr.cell.molecule.NeighborCellManagerMolecular

assignCell, assignCellAll, boundaryInflate, checkDimensions, getCell, getCellRange, getDoApplyPBC, getLattice, getPotentialRange, makeMCMoveListener, releaseAgent, setCellRange, setDoApplyPBC, setPotentialRange

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

potentialMaster

protected PotentialMasterListMolecular potentialMaster

Constructor Detail

NeighborCellManagerListMolecular

public NeighborCellManagerListMolecular(Simulation sim,
                                        Box box,
                                        double potentialRange,
                                        Space _space)

NeighborCellManagerListMolecular

public NeighborCellManagerListMolecular(Simulation sim,
                                        Box box,
                                        double potentialRange,
                                        IMoleculePositionDefinition positionDefinition,
                                        Space _space)

Method Detail

setPotentialMaster

public void setPotentialMaster(PotentialMasterListMolecular newPotentialMaster)

makeAgent

public java.lang.Object makeAgent(IMolecule molecule)

Description copied from class: NeighborCellManagerMolecular

Returns the cell containing the given atom. The atom is added to the cell's atom list.

Specified by:

makeAgent in interface MoleculeAgentManager.MoleculeAgentSource

Overrides:

makeAgent in class NeighborCellManagerMolecular