Package etomica.nbr.list.molecule

Class MoleculePotentialList

java.lang.Object

etomica.nbr.list.molecule.MoleculePotentialList

All Implemented Interfaces:

java.io.Serializable

public class MoleculePotentialList
extends java.lang.Object
implements java.io.Serializable

Class used to maintain list of whether each 1-body potential that applies to a species is currently in effect or not for an Molecule.

See Also:

Serialized Form

Field Summary

Fields

Modifier and Type	Field	Description
protected boolean[]	isInteractingList

Constructor Summary

Constructors

Constructor	Description
MoleculePotentialList()	Constructs sequencer for the given atom.

Method Summary

Modifier and Type	Method	Description
void	clearNbrs()	Clears neighbor lists, resetting all flags to false (not interacting).
boolean[]	getInteractingList()	Returns booleans indicating whether the Atom interacts with each potential or not.
protected void	setCapacity(int index)
void	setIsInteracting(boolean flag, int index)	Sets whether the molecule is interacting or not with the potential corresponding to the given index.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

isInteractingList

protected boolean[] isInteractingList

Constructor Detail

MoleculePotentialList

public MoleculePotentialList()

Constructs sequencer for the given atom.

Method Detail

setIsInteracting

public void setIsInteracting(boolean flag,
                             int index)

Sets whether the molecule is interacting or not with the potential corresponding to the given index.

getInteractingList

public boolean[] getInteractingList()

Returns booleans indicating whether the Atom interacts with each potential or not.

setCapacity

protected void setCapacity(int index)

clearNbrs

public void clearNbrs()

Clears neighbor lists, resetting all flags to false (not interacting).