Package etomica.modules.glass

Class DataSourceHistogramMSD

java.lang.Object

etomica.modules.glass.DataSourceHistogramMSD

All Implemented Interfaces:

DataSourceIndependent, IDataSource, DataSourceMSD.MSDSink

public class DataSourceHistogramMSD
extends java.lang.Object
implements IDataSource, DataSourceIndependent, DataSourceMSD.MSDSink

Field Summary

Fields

Modifier and Type	Field	Description
protected DataFunction	data
protected DataFunction.DataInfoFunction	dataInfo
protected boolean	enabled
protected Histogram[]	histograms
protected IntegratorMD	integrator
protected int	interval
protected long	step0
protected DataTag	tag
protected DataDoubleArray	xData
protected DataDoubleArray.DataInfoDoubleArray	xDataInfo
protected DataTag	xTag

Constructor Summary

Constructors

Constructor	Description
DataSourceHistogramMSD(IntegratorMD integrator)

Method Summary

Modifier and Type	Method	Description
IData	getData()
IDataInfo	getDataInfo()
boolean	getEnabled()
int	getIndependentArrayDimension()	Returns the number of independent data dimensions
DataDoubleArray	getIndependentData(int i)	Returns the X data for the given dimension
DataDoubleArray.DataInfoDoubleArray	getIndependentDataInfo(int i)	Returns the DataInfo for the given dimension
DataTag	getIndependentTag()	Returns the tag associated with this DataSource.
DataTag	getTag()
void	putMSD(int log2interval, long step, double msd)
void	resetStep0()
void	setEnabled(boolean isEnabled)
void	setInterval(int i)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

xData

protected DataDoubleArray xData

xDataInfo

protected DataDoubleArray.DataInfoDoubleArray xDataInfo

data

protected DataFunction data

dataInfo

protected DataFunction.DataInfoFunction dataInfo

xTag

protected final DataTag xTag

tag

protected final DataTag tag

integrator

protected final IntegratorMD integrator

step0

protected long step0

enabled

protected boolean enabled

interval

protected int interval

histograms

protected Histogram[] histograms

Constructor Detail

DataSourceHistogramMSD

public DataSourceHistogramMSD(IntegratorMD integrator)

Method Detail

resetStep0

public void resetStep0()

setInterval

public void setInterval(int i)

setEnabled

public void setEnabled(boolean isEnabled)

getEnabled

public boolean getEnabled()

getData

public IData getData()

Specified by:

getData in interface IDataSource

Returns:

the data given by this source

getTag

public DataTag getTag()

Specified by:

getTag in interface IDataSource

Returns:

a tag that uniquely identifies the IDataInfo

getDataInfo

public IDataInfo getDataInfo()

Specified by:

getDataInfo in interface IDataSource

getIndependentData

public DataDoubleArray getIndependentData(int i)

Description copied from interface: DataSourceIndependent

Returns the X data for the given dimension

Specified by:

getIndependentData in interface DataSourceIndependent

getIndependentDataInfo

public DataDoubleArray.DataInfoDoubleArray getIndependentDataInfo(int i)

Description copied from interface: DataSourceIndependent

Returns the DataInfo for the given dimension

Specified by:

getIndependentDataInfo in interface DataSourceIndependent

getIndependentArrayDimension

public int getIndependentArrayDimension()

Description copied from interface: DataSourceIndependent

Returns the number of independent data dimensions

Specified by:

getIndependentArrayDimension in interface DataSourceIndependent

getIndependentTag

public DataTag getIndependentTag()

Description copied from interface: DataSourceIndependent

Returns the tag associated with this DataSource.

Specified by:

getIndependentTag in interface DataSourceIndependent

putMSD

public void putMSD(int log2interval,
                   long step,
                   double msd)

Specified by:

putMSD in interface DataSourceMSD.MSDSink