Package etomica.graph.operations

Class BiComponentSubst

java.lang.Object

etomica.graph.operations.BiComponentSubst

All Implemented Interfaces:

Unary

public class BiComponentSubst
extends java.lang.Object
implements Unary

This class handles the substitution g = A where g is a Graph and A is a set of Graph. Each graph gArg in Arg is split into bicomponents (gArg=c1*c2*c3) and if a component ci "matches" g then we replace the bonding arrangement within ci to match each of the graphs from A.

Nested Class Summary

Nested Classes

Modifier and Type	Class	Description
static class	BiComponentSubst.BiComponentSubstParameters

Field Summary

Fields

Modifier and Type	Field	Description
protected MulFlexible	mulFlex
protected MulScalar	mulScalar

Constructor Summary

Constructors

Constructor	Description
BiComponentSubst()

Method Summary

Modifier and Type	Method	Description
java.util.Set<Graph>	apply(Graph g, BiComponentSubst.BiComponentSubstParameters params)
java.util.Set<Graph>	apply(java.util.Set<Graph> argument, Parameters params)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

mulFlex

protected final MulFlexible mulFlex

mulScalar

protected final MulScalar mulScalar

Constructor Detail

BiComponentSubst

public BiComponentSubst()

Method Detail

apply

public java.util.Set<Graph> apply(java.util.Set<Graph> argument,
                                  Parameters params)

Specified by:

apply in interface Unary

apply

public java.util.Set<Graph> apply(Graph g,
                                  BiComponentSubst.BiComponentSubstParameters params)