Package etomica.graph.operations

Class MulFlexible

java.lang.Object

etomica.graph.operations.MulFlexible

All Implemented Interfaces:

Binary

public class MulFlexible
extends java.lang.Object
implements Binary

Perform graph multiplication for flexible molecules. Where possible, the result is constructed by superimposing a from one diagram on top of a node from another diagram. The superimposing is possible when the following criteria are met: 1. the nodes being superimposed must be the same color. 2. At least one of the nodes must be a root node. 3a. The node color must correspond to a rigid molecule. or 3b. One of the nodes must have no edges.

When not possible to superimpose, the result of multiplication for each pair of diagrams is a diagram composed by both original diagrams without any connection between them (the new diagram is disconnected).

Nested Class Summary

Nested Classes

Modifier and Type	Class	Description
static class	MulFlexible.MulFlexibleParameters

Constructor Summary

Constructors

Constructor	Description
MulFlexible()

Method Summary

Modifier and Type	Method	Description
Graph	apply(Graph g1, Graph g2, MulFlexible.MulFlexibleParameters params)
java.util.Set<Graph>	apply(java.util.Set<Graph> argument, java.util.Set<Graph>[] sets2, Parameters params)
java.util.Set<Graph>	apply(java.util.Set<Graph> argument, java.util.Set<Graph> argument2, Parameters params)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

MulFlexible

public MulFlexible()

Method Detail

apply

public java.util.Set<Graph> apply(java.util.Set<Graph> argument,
                                  java.util.Set<Graph> argument2,
                                  Parameters params)

Specified by:

apply in interface Binary

apply

public java.util.Set<Graph> apply(java.util.Set<Graph> argument,
                                  java.util.Set<Graph>[] sets2,
                                  Parameters params)

apply

public Graph apply(Graph g1,
                   Graph g2,
                   MulFlexible.MulFlexibleParameters params)