Constant Field Values

Contents

• etomica.AlkaneEH.*
• etomica.compatibility.*
• etomica.data.*
• etomica.graph.*
• etomica.integrator.*
• etomica.lattice.*
• etomica.math.*
• etomica.models.*
• etomica.modules.*
• etomica.normalmode.*
• etomica.overlap.*
• etomica.potential.*
• etomica.space3d.*
• etomica.starpolymer.*
• etomica.statmech.*
• etomica.units.*
• etomica.util.*
• etomica.virial.*
• g3dsys.control.*
• g3dsys.images.*
• org.jmol.*

etomica.AlkaneEH.*

etomica.AlkaneEH.ConformationAlkaneEH

Modifier and Type	Constant Field	Value
protected final double	angleCCC	1.9669860669976096
protected final double	angleCCH	1.9320794819577227
protected final double	angleHCH	1.8814649336498872
protected final double	CCbondL	1.535
protected final double	CHbondL	0.55

etomica.AlkaneEH.SpeciesMethane

Modifier and Type	Constant Field	Value
public static final int	indexC	0
public static final int	indexH1	1
public static final int	indexH2	2
public static final int	indexH3	3
public static final int	indexH4	4

etomica.compatibility.*

etomica.compatibility.Feature

Modifier and Type	Constant Field	Value
public static final int	CONTAINS	4
public static final int	GREATER_THAN	1
public static final int	INCOMPATIBLE_TYPES	3
public static final int	IS_EMPTY	2
public static final int	IS_EQUAL	0
public static final int	LESS_THAN	-1

etomica.data.*

etomica.data.AccumulatorAverageCollapsingLog

Modifier and Type	Constant Field	Value
protected final boolean	withReplacement	true

etomica.graph.*

etomica.graph.engine.Parser

Modifier and Type	Constant Field	Value
public static final java.lang.String	BINARY_OP_CONV	"conv"
public static final java.lang.String	BINARY_OP_DEL	"del"
public static final java.lang.String	BINARY_OP_MUL	"mul"
public static final java.lang.String	BINARY_OP_SUB	"sub"
public static final java.lang.String	BINARY_OP_SUM	"sum"
public static final java.lang.String	BINARY_OP_UNION	"union"
public static final java.lang.String	COMMAND_CLEAR	"clear"
public static final java.lang.String	COMMAND_DISPLAY	"display"
public static final java.lang.String	COMMAND_DROP	"drop"
public static final java.lang.String	COMMAND_LIST	"list"
public static final java.lang.String	COMMAND_PRINT	"print"
public static final java.lang.String	COMMAND_QUIT	"quit"
public static final java.lang.String	COMMAND_READ	"read"
public static final java.lang.String	COMMAND_READDB	"readdb"
public static final java.lang.String	COMMAND_RUN	"run"
public static final java.lang.String	COMMAND_SAVE	"save"
public static final java.lang.String	COMMAND_SET	"set"
public static final java.lang.String	COMMAND_SUMMARY	"summary"
public static final java.lang.String	COMMAND_WRITE	"write"
public static final java.lang.String	COMMAND_WRITEDB	"writedb"
public static final java.lang.String	CONSTRUCTOR_COLORED	"colored"
public static final java.lang.String	CONSTRUCTOR_ISOCOLORED	"iso_colored"
public static final java.lang.String	CONSTRUCTOR_ISOMONO	"iso_mono"
public static final java.lang.String	CONSTRUCTOR_MONO	"mono"
public static final java.lang.String	FILTER_HAS_ARTICULATION_PAIR	"has_articulation_pair"
public static final java.lang.String	FILTER_HAS_ARTICULATION_POINT	"has_articulation_point"
public static final java.lang.String	FILTER_HAS_NO_ROOT_EDGE	"has_no_root_edge"
public static final java.lang.String	FILTER_HAS_NODAL_POINT	"has_nodal_point"
public static final java.lang.String	FILTER_IS_BICONNECTED	"is_biconnected"
public static final java.lang.String	FILTER_IS_CONNECTED	"is_connected"
public static final java.lang.String	UNARY_OP_EDIF	"edif"
public static final java.lang.String	UNARY_OP_EXP	"exp"
public static final java.lang.String	UNARY_OP_INT	"int"
public static final java.lang.String	UNARY_OP_ISO	"iso"
public static final java.lang.String	UNARY_OP_NCOPY	"ncopy"
public static final java.lang.String	UNARY_OP_NDIF	"ndif"
public static final java.lang.String	UNARY_OP_PCOPY	"pcopy"
public static final java.lang.String	UNARY_OP_POWER	"pow"
public static final java.lang.String	UNARY_OP_RELABEL	"relabel"
public static final java.lang.String	UNARY_OP_SPLIT	"split"

etomica.graph.engine.impl.ParserImpl

Modifier and Type	Constant Field	Value
public static final boolean	DEBUG_MODE	false

etomica.graph.isomorphism.SearchState

Modifier and Type	Constant Field	Value
public static final byte	NULL_NODE	-1
public static final java.lang.String	ULLMAN_ALGORITHM	"Ullman"
public static final java.lang.String	VF_ALGORITHM	"VF"
public static final java.lang.String	VF2_ALGORITHM	"VF2"

etomica.graph.model.Bitmap

Modifier and Type	Constant Field	Value
public static final char	CH_ONE	49
public static final char	CH_ZERO	48
public static final long	LONG_MASK	-1L
public static final long	LONG_ONE	1L
public static final long	LONG_ZERO	0L
public static final byte	SZ_LONG	64

etomica.graph.model.Metadata

Modifier and Type	Constant Field	Value
public static final java.lang.String	COLOR_0	"black"
public static final java.lang.String	COLOR_1	"red"
public static final java.lang.String	COLOR_10	"orange"
public static final java.lang.String	COLOR_11	"maroon"
public static final java.lang.String	COLOR_12	"olive"
public static final java.lang.String	COLOR_2	"green"
public static final java.lang.String	COLOR_3	"darkviolet"
public static final java.lang.String	COLOR_4	"royalblue"
public static final java.lang.String	COLOR_5	"darkorange"
public static final java.lang.String	COLOR_6	"fuchsia"
public static final java.lang.String	COLOR_7	"yellow"
public static final java.lang.String	COLOR_8	"darkblue"
public static final java.lang.String	COLOR_9	"slategray"
public static final char	COLOR_CODE_0	65
public static final char	COLOR_CODE_1	66
public static final char	COLOR_CODE_2	67
public static final char	COLOR_CODE_3	68
public static final char	COLOR_CODE_4	69
public static final char	COLOR_CODE_5	70
public static final char	COLOR_CODE_6	71
public static final char	COLOR_CODE_7	72
public static final char	COLOR_CODE_8	73
public static final char	COLOR_CODE_9	74
public static final char	COLOR_CODE_DEFAULT	65
public static final char	TYPE_EDGE_ANY	69
public static final char	TYPE_NODE_DEFAULT	70
public static final char	TYPE_NODE_FIELD	70
public static final char	TYPE_NODE_ROOT	82

etomica.graph.traversal.BitmapUtils

Modifier and Type	Constant Field	Value
protected static final byte	SZ_INT	32

etomica.graph.traversal.Traversal

Modifier and Type	Constant Field	Value
public static final byte	ERROR	96
public static final byte	ERROR_TRAVERSAL_EDGES	125
public static final byte	ERROR_TRAVERSAL_NODES	126
public static final byte	ERROR_TRAVERSAL_ROOT	127
public static final byte	NODE_NULL	-1
public static final byte	STATUS_ARTICULATION_POINT	32
public static final byte	STATUS_START_BICOMPONENT	4
public static final byte	STATUS_START_COMPONENT	1
public static final byte	STATUS_VISITED_ALL	16
public static final byte	STATUS_VISITED_BICOMPONENT	8
public static final byte	STATUS_VISITED_COMPONENT	2
public static final byte	STATUS_VISITED_NODE	0

etomica.graph.view.rasterizer.DestinationType

Modifier and Type	Constant Field	Value
public static final int	JPEG_CODE	1
public static final java.lang.String	JPEG_EXTENSION	".jpg"
public static final java.lang.String	JPEG_STR	"image/jpeg"
public static final int	PDF_CODE	3
public static final java.lang.String	PDF_EXTENSION	".pdf"
public static final java.lang.String	PDF_STR	"application/pdf"
public static final int	PNG_CODE	0
public static final java.lang.String	PNG_EXTENSION	".png"
public static final java.lang.String	PNG_STR	"image/png"
public static final int	TIFF_CODE	2
public static final java.lang.String	TIFF_EXTENSION	".tif"
public static final java.lang.String	TIFF_STR	"image/tiff"

etomica.graph.view.rasterizer.Main

Modifier and Type	Constant Field	Value
public static final java.lang.String	ERROR_ILLEGAL_ARGUMENT	"Main.error.illegal.argument"
public static final java.lang.String	ERROR_NOT_ENOUGH_OPTION_VALUES	"Main.error.not.enough.option.values"
public static final java.lang.String	ERROR_WHILE_CONVERTING_FILES	"Main.error.while.converting.files"
public static final java.lang.String	MESSAGE_ABOUT_TO_TRANSCODE	"Main.message.about.to.transcode"
public static final java.lang.String	MESSAGE_ABOUT_TO_TRANSCODE_SOURCE	"Main.message.about.to.transcode.source"
public static final java.lang.String	MESSAGE_CONVERSION_FAILED	"Main.message.conversion.failed"
public static final java.lang.String	MESSAGE_CONVERSION_SUCCESS	"Main.message.conversion.success"
public static final java.lang.String	RASTERIZER_SECURITY_POLICY	"org/apache/batik/apps/rasterizer/resources/rasterizer.policy"

etomica.graph.view.rasterizer.Messages

Modifier and Type	Constant Field	Value
protected static final java.lang.String	RESOURCES	"etomica.virial.cluster2.ui.rasterizer.resources.Messages"

etomica.graph.view.rasterizer.SVGConverter

Modifier and Type	Constant Field	Value
protected static final float	DEFAULT_HEIGHT	-1.0f
protected static final float	DEFAULT_QUALITY	-1.0f
protected static final float	DEFAULT_WIDTH	-1.0f
public static final java.lang.String	ERROR_CANNOT_ACCESS_TRANSCODER	"SVGConverter.error.cannot.access.transcoder"
public static final java.lang.String	ERROR_CANNOT_COMPUTE_DESTINATION	"SVGConverter.error.cannot.compute.destination"
public static final java.lang.String	ERROR_CANNOT_OPEN_OUTPUT_FILE	"SVGConverter.error.cannot.open.output.file"
public static final java.lang.String	ERROR_CANNOT_OPEN_SOURCE	"SVGConverter.error.cannot.open.source"
public static final java.lang.String	ERROR_CANNOT_READ_SOURCE	"SVGConverter.error.cannot.read.source"
public static final java.lang.String	ERROR_CANNOT_USE_DST_FILE	"SVGConverter.error.cannot.use.dst.file"
public static final java.lang.String	ERROR_NO_SOURCES_SPECIFIED	"SVGConverter.error.no.sources.specified"
public static final java.lang.String	ERROR_OUTPUT_NOT_WRITEABLE	"SVGConverter.error.output.not.writeable"
public static final java.lang.String	ERROR_SOURCE_SAME_AS_DESTINATION	"SVGConverter.error.source.same.as.destination"
public static final java.lang.String	ERROR_UNABLE_TO_CREATE_OUTPUT_DIR	"SVGConverter.error.unable.to.create.output.dir"
public static final java.lang.String	ERROR_WHILE_RASTERIZING_FILE	"SVGConverter.error.while.rasterizing.file"
protected static final float	MAXIMUM_QUALITY	0.9900000095367432f
protected static final java.lang.String	SVG_EXTENSION	".svg"

etomica.graph.view.rasterizer.SVGConverter.SVGFileFilter

Modifier and Type	Constant Field	Value
public static final java.lang.String	SVG_EXTENSION	".svg"

etomica.graph.view.rasterizer.SVGConverterURLSource

Modifier and Type	Constant Field	Value
public static final java.lang.String	ERROR_INVALID_URL	"SVGConverterURLSource.error.invalid.url"
protected static final java.lang.String	SVG_EXTENSION	".svg"
protected static final java.lang.String	SVGZ_EXTENSION	".svgz"

etomica.graphics.*

etomica.graphics.DevicePlotPoints

Modifier and Type	Constant Field	Value
public static final int	MAX_X	1
public static final int	MAX_Y	3
public static final int	MIN_X	0
public static final int	MIN_Y	2
public static final int	X_DIM	0
public static final int	Y_DIM	1

etomica.graphics.DeviceThermoSlider

Modifier and Type	Constant Field	Value
protected static final int	DEFAULT_MAX_TEMPERATURE	300
protected static final int	DEFAULT_MIN_TEMPERATURE	0

etomica.graphics.DisplayBox

Modifier and Type	Constant Field	Value
public static final int	BOTTOM	1
public static final int	CENTER	0
public static final int	LEFT	-1
public static final int	RIGHT	1
public static final int	TOP	-1

etomica.graphics.DisplayCanvas

Modifier and Type	Constant Field	Value
public static final int	DRAW_BOUNDARY_ALL	3
public static final int	DRAW_BOUNDARY_MAX	4
public static final int	DRAW_BOUNDARY_NONE	0
public static final int	DRAW_BOUNDARY_OUTLINE	1
public static final int	DRAW_BOUNDARY_SHELL	2

etomica.graphics.DisplayPolytope

Modifier and Type	Constant Field	Value
public static final int	BOTTOM	1
public static final int	CENTER	0
public static final int	LEFT	-1
public static final int	RIGHT	1
public static final int	TOP	-1

etomica.graphics.SimulationGraphic

Modifier and Type	Constant Field	Value
public static final int	GRAPHIC_ONLY	0
public static final int	TABBED_PANE	1

etomica.integrator.*

etomica.integrator.IntegratorRigidIterative

Modifier and Type	Constant Field	Value
protected final boolean	storeAngularMomentum	false

etomica.integrator.mcmove.MCMoveIDBiasAction

Modifier and Type	Constant Field	Value
protected final double	maxBiasMinN	2.0
protected final double	ratioMaxN	1.0

etomica.lattice.*

etomica.lattice.crystal.Primitive

Modifier and Type	Constant Field	Value
protected static final double	rightAngle	1.5707963267948966

etomica.math.*

etomica.math.Gamma

Modifier and Type	Constant Field	Value
protected static final float	PREC	28.89889907836914f

etomica.models.*

etomica.models.co2.ConformationCO2

Modifier and Type	Constant Field	Value
protected static final double	bondlength	1.16

etomica.models.co2.P2CO2H2OWheatley

Modifier and Type	Constant Field	Value
protected static final double	checkCore	3.2
protected static final double	checkCoreCO	4.2
protected static final double	core	3.1
protected static final double	coreCO	4.0
protected static final double	sitesCO2L	2.2114
protected static final double	sitesHH	1.45365
protected static final double	sitesOH	1.12169

etomica.models.co2.P2CO2Hellmann

Modifier and Type	Constant Field	Value
protected static final int	nsites	7

etomica.models.co2.P2CO2Hellmann.P2CO2SC

Modifier and Type	Constant Field	Value
protected final double	bondL	1.1625

etomica.models.co2.PNCO2GCPM.P3GCPMAxilrodTeller

Modifier and Type	Constant Field	Value
public static final double	anx	2.1
public static final double	dpolx	1.95

etomica.models.co2.SpeciesTraPPECO2

Modifier and Type	Constant Field	Value
public static final int	indexC	0
public static final int	indexOleft	1
public static final int	indexOright	2

etomica.models.nitrogen.ConformationNitrogen

Modifier and Type	Constant Field	Value
protected static final double	bondOrigN	0.547
protected static final double	bondOrigP1	1.044
protected static final double	bondOrigP2	0.847

etomica.models.nitrogen.ConformationNitrogenShellModel

Modifier and Type	Constant Field	Value
protected static final double	bondOrigN	0.5485
protected static final double	bondOrigP	0.81

etomica.models.nitrogen.P2Nitrogen

Modifier and Type	Constant Field	Value
protected final double	alpha1	4.037
protected final double	alpha2	3.48
protected final double	R0	3.01006875
protected final double	R1	3.4494569

etomica.models.nitrogen.P2NitrogenAB

Modifier and Type	Constant Field	Value
protected final double	alpha1	4.037
protected final double	alpha2	3.48
protected final double	R0	3.01006875
protected final double	R1	3.4494569

etomica.models.nitrogen.P2NitrogenAnisotropic

Modifier and Type	Constant Field	Value
protected final double	alpha1	4.037
protected final double	alpha2	3.48
protected final double	R0	3.01006875
protected final double	R1	3.4494569

etomica.models.nitrogen.P2NitrogenShellModel

Modifier and Type	Constant Field	Value
protected final double	alpha1	10.6
protected final double	alpha2	12.7
protected final double	delta1	4.531
protected final double	delta2	3.457
protected final double	epsilon1	36.44
protected final double	epsilon2	35.61

etomica.models.nitrogen.SpeciesN2

Modifier and Type	Constant Field	Value
public static final int	indexN1	0
public static final int	indexN2	1
public static final int	indexP1left	2
public static final int	indexP1right	4
public static final int	indexP2left	3
public static final int	indexP2right	5

etomica.models.nitrogen.SpeciesN2ShellModel

Modifier and Type	Constant Field	Value
public static final int	indexCenter	2
public static final int	indexN1	0
public static final int	indexN2	1
public static final int	indexP1left	3
public static final int	indexP1right	4

etomica.models.OPLS.SpeciesAceticAcid

Modifier and Type	Constant Field	Value
public static final int	indexC	1
public static final int	indexCH3	0
public static final int	indexDBO	2
public static final int	indexH	4
public static final int	indexSBO	3

etomica.models.rowley.DimerApproach

Modifier and Type	Constant Field	Value
public static final boolean	pointCharges	true
public static final long	serialVersionUID	1L

etomica.models.rowley.SpeciesEthanol

Modifier and Type	Constant Field	Value
public static final int	indexaC	1
public static final int	indexaH	2
public static final int	indexC	3
public static final int	indexH1a	4
public static final int	indexH1b	5
public static final int	indexH2a	6
public static final int	indexH2b	7
public static final int	indexH2c	8
public static final int	indexO	0
public static final int	indexX	9

etomica.models.rowley.SpeciesMethanol

Modifier and Type	Constant Field	Value
public static final int	indexaC	1
public static final int	indexaH	2
public static final int	indexH1	3
public static final int	indexH2a	4
public static final int	indexH2b	5
public static final int	indexO	0
public static final int	indexX	6

etomica.models.water.ConformationWater3P

Modifier and Type	Constant Field	Value
public static final double	angleHOH	1.911135530933791
public static final double	bondLengthOH	1.0

etomica.models.water.ConformationWaterTIP4P

Modifier and Type	Constant Field	Value
public static final double	angleHOH	1.8242181341844732
public static final double	bondLengthOH	0.9572
public static final double	rOM	0.15

etomica.models.water.P2HardAssociationGCPMReference

Modifier and Type	Constant Field	Value
public static final int	BONDAC	1
public static final int	BONDBC	2
public static final int	BONDCA	3
public static final int	BONDCB	4

etomica.models.water.P2WaterSPCE

Modifier and Type	Constant Field	Value
public static final double	SIGMA	3.165557890199881

etomica.models.water.P2WaterSzalewicz

Modifier and Type	Constant Field	Value
public static final boolean	broken3body	false
protected static final double	core	1.2
protected static final double	gamma	20.0
protected static final int	nlin	144
protected static final int	npol	3
protected static final int	nsite3	17
protected static final double	R0	1.4

etomica.models.water.PNWaterGCPMThreeSite

Modifier and Type	Constant Field	Value
public static final int	BONDAC	1
public static final int	BONDBC	2
public static final int	BONDCA	3
public static final int	BONDCB	4

etomica.models.water.SpeciesWater4P

Modifier and Type	Constant Field	Value
public static final int	indexH1	0
public static final int	indexH2	1
public static final int	indexM	3
public static final int	indexO	2

etomica.models.water.SpeciesWater4PCOM

Modifier and Type	Constant Field	Value
public static final int	indexC	4
public static final int	indexH1	0
public static final int	indexH2	1
public static final int	indexM	3
public static final int	indexO	2

etomica.modules.*

etomica.modules.multiharmonic.MultiharmonicGraphicMC

Modifier and Type	Constant Field	Value
protected static final int	REPAINT_INTERVAL	300000

etomica.modules.multiharmonic.mbar.MultiharmonicGraphicMC

Modifier and Type	Constant Field	Value
protected static final int	REPAINT_INTERVAL	300000

etomica.modules.multiharmonic.overlap.MultiharmonicGraphicMC

Modifier and Type	Constant Field	Value
protected static final int	REPAINT_INTERVAL	300000

etomica.modules.multiharmonic.overlap.MultiharmonicGraphicMC.DataSourceAlphaFE

Modifier and Type	Constant Field	Value
public static final int	AVG	1
public static final int	BIAS	5
public static final int	SKEW	4
public static final int	STDEV	2

etomica.modules.multiharmonic.overlap.MultiharmonicGraphicMC.DataSourceBias

Modifier and Type	Constant Field	Value
public static final int	AVG	1
public static final int	BIAS	5
public static final int	SKEW	4
public static final int	STDEV	2
public static final int	STDEV2	3

etomica.modules.multiharmonic.umbrella.MultiharmonicGraphicMC

Modifier and Type	Constant Field	Value
protected static final int	REPAINT_INTERVAL	300000

etomica.modules.osmosis.OsmosisSim

Modifier and Type	Constant Field	Value
protected static final int	initialSolute	10
protected static final int	initialSolvent	50

etomica.modules.pistoncylinder.PistonCylinderGraphic

Modifier and Type	Constant Field	Value
public static final java.lang.String	IDEAL_GAS	"Ideal gas"
public static final java.lang.String	REPULSION_ATTRACTION	"Repulsion and attraction"
public static final java.lang.String	REPULSION_ONLY	"Repulsion only"

etomica.normalmode.*

etomica.normalmode.MCMoveVolumeSolid

Modifier and Type	Constant Field	Value
protected final boolean	doCorti	true

etomica.normalmode.SoftSphereSolidEOS

Modifier and Type	Constant Field	Value
public static final int	BCC	2
public static final int	FCC	0
public static final int	HCP	1

etomica.normalmode.SoftSphereSolidEOSCalculator

Modifier and Type	Constant Field	Value
public static final int	BCC	2
public static final int	FCC	0
public static final int	HCP	1

etomica.normalmode.SpeciesHSDimer

Modifier and Type	Constant Field	Value
public static final int	indexAtom1	0
public static final int	indexAtom2	1

etomica.overlap.*

etomica.overlap.DataOverlap

Modifier and Type	Constant Field	Value
protected static final int	RATIO	2
protected static final int	REF	0
protected static final int	TARGET	1

etomica.potential.*

etomica.potential.EwaldSumMolecules

Modifier and Type	Constant Field	Value
public final int	coefficient_fourier	4

etomica.potential.P1HydrogenMielke

Modifier and Type	Constant Field	Value
protected static final double	alpha	3.980917850296971
protected static final double	beta	0.2
protected static final double	c10	-3285.828
protected static final double	c6	-6.499027
protected static final double	c8	-124.3991
protected static final double	re	1.401

etomica.potential.P2HePCKLJS

Modifier and Type	Constant Field	Value
protected static final double	a	3.6489030365283
protected static final double	alpha	0.0072973525205055605
protected static final double	b	2.36824871743591
protected static final double	C6BO	1.460977837725
protected static final double	eta	4.09423805117871

etomica.potential.P2HePCKLJS.P2HeQFH

Modifier and Type	Constant Field	Value
protected final double	mass	4.002602

etomica.potential.P2HePCKLJS.P2HeTI

Modifier and Type	Constant Field	Value
protected final double	mass	4.002602

etomica.potential.P2HeSimplified

Modifier and Type	Constant Field	Value
protected final double	sigmaHC2	2.5600000000000005
public static final boolean	useC10	false

etomica.potential.P2HeSimplified.P2HeQFH

Modifier and Type	Constant Field	Value
protected final double	mass	4.002602

etomica.potential.P2HeSimplified.P2HeTI

Modifier and Type	Constant Field	Value
protected final double	mass	4.002602

etomica.potential.P2HydrogenHindePatkowskiAtomic

Modifier and Type	Constant Field	Value
public static final double	blMax	1.2
protected static final double	rMin	1.4

etomica.potential.P2HydrogenPatkowski

Modifier and Type	Constant Field	Value
protected static final int	irpowex	1
protected static final int	irpowsp	3
protected static final int	lcex	10
protected static final int	lcsp	32
protected static final int	llex	5
protected static final int	llsp	8
protected static final int	n_max	9
protected static final int	n_min	4
protected static final int	nex	5
protected static final int	nsp	8
protected static final double	rMin	1.4

etomica.potential.P2HydrogenPatkowskiAtomic

Modifier and Type	Constant Field	Value
protected static final int	irpowex	1
protected static final int	irpowsp	3
protected static final int	lcex	10
protected static final int	lcsp	32
protected static final int	llex	5
protected static final int	llsp	8
protected static final int	n_max	9
protected static final int	n_min	4
protected static final int	nex	5
protected static final int	nsp	8
protected static final double	rMin	1.4

etomica.potential.P2NitrogenHellmann

Modifier and Type	Constant Field	Value
public static final double	blN2	1.1014
protected static final double	dHSCore	2.0

etomica.potential.P2O2Bartolomei

Modifier and Type	Constant Field	Value
protected static final int	mxter	47
protected static final int	nbin	100
protected static final int	nfctmx	101
protected static final double	rfit0	19.0

etomica.potential.P2O2Bartolomei.P2O2TI

Modifier and Type	Constant Field	Value
protected final double	mass	4.002602

etomica.potential.P2WaterPotentialsJankowski

Modifier and Type	Constant Field	Value
protected static final double	a0	0.529177249
protected static final double	alfst	0.1
protected static final double	anoise	1.0E-9
protected static final double	cmtoau	219474.624
protected static final double	har2kcal	627.51
protected static final int	iasdone	1
protected static final int	idonl	1
protected static final int	iopt	1
protected static final int	ipr	0
protected static final int	isyst	2
protected static final int	iweight	315
protected static final int	linp	5
protected static final int	lout	7
protected static final int	maxpar1	18
protected static final int	maxpar2	84
protected static final double	mH	1.0078250321
protected static final double	mH2O	18.0105646863
protected static final double	mO	15.9949146221
protected static final int	naamax	14
protected static final int	nbbmax	14
protected static final int	npowers	3
protected static final int	nsitea	8
protected static final int	nsiteb	8
protected static final int	nsitemax	8
protected static final int	ntpot	124161
protected static final int	ntypemax	6
protected static final double	r0	0.0
protected static final double	rcond	1.0E-12
protected static final double	rHSCore	1.2
protected static final double	safetl	200.0
protected static final double	timlim	880000.0
protected static final double	tolf	0.001
protected static final double	tolr	200.0

etomica.potential.P3CPSNonAdditiveHe

Modifier and Type	Constant Field	Value
protected static final double	beta3_111	0.85081603100473
protected static final double	beta3_112	1.03935993289613
protected static final double	beta3_113	2.35163790098234
protected static final double	beta3_122	20.0
protected static final double	beta3_222	7.74979337816275
protected static final double	beta4211_1112	2.22023197004267
protected static final double	beta4211_1121	2.33977220590245
protected static final double	beta4211_2111	1.96782469219456
protected static final double	beta4220_1111	1.76277419240966
protected static final double	beta4220_1211	2.13546395662687
protected static final double	beta4220_2111	0.959706781068175
protected static final double	Z3_111	0.49311
protected static final double	Z3_112	0.92372
protected static final double	Z3_113	4.1241
protected static final double	Z3_122	1.7377
protected static final double	Z3_222	3.2839
protected static final double	Z4211_1112	-370.838300778413
protected static final double	Z4211_1121	673.766716043939
protected static final double	Z4211_2111	-553.474291722504
protected static final double	Z4220_1111	-15.2910806164061
protected static final double	Z4220_1211	158.205832955569
protected static final double	Z4220_2111	112.479143795999

etomica.potential.P3CPSNonAdditiveHeLessSimplified

Modifier and Type	Constant Field	Value
protected static final double	Z3_111	0.49311

etomica.potential.P3HydrogenATM

Modifier and Type	Constant Field	Value
protected static final double	E0	49400.0

etomica.potential.P3HydrogenManzhos

Modifier and Type	Constant Field	Value
protected static final int	d	9
protected static final int	D	12
protected final double	d0	0.126575
protected static final int	L	1
protected static final int	N	80

etomica.potential.P3NitrogenHellmannNonAdditive

Modifier and Type	Constant Field	Value
protected static final double	alphaIso	11.74
public static final double	blN2	1.1014
protected static final double	C9iso	619.93

etomica.space3d.*

etomica.space3d.Vector3D

Modifier and Type	Constant Field	Value
protected static final int	nLookUp	5000

etomica.starpolymer.*

etomica.starpolymer.VirialPolymerOverlapMC.VirialHSParam

Modifier and Type	Constant Field	Value
public static final int	CHAINS	1
public static final int	TREE	0

etomica.starpolymer.VirialPolymerOverlapWithMD.VirialHSParam

Modifier and Type	Constant Field	Value
public static final int	CHAINS	1
public static final int	TREE	0

etomica.starpolymer.VirialPolymerOverlapWithMDB3.VirialHSParam

Modifier and Type	Constant Field	Value
public static final int	CHAINS	1
public static final int	TREE	0

etomica.statmech.*

etomica.statmech.HardSphereFluid

Modifier and Type	Constant Field	Value
public static final double	a	7123.0875

etomica.statmech.HardSphereSolid

Modifier and Type	Constant Field	Value
protected static final double	rho0	1.0409

etomica.units.*

etomica.units.Prefix

Modifier and Type	Constant Field	Value
public static final boolean	ALLOWED	true
public static final boolean	NOT_ALLOWED	false

etomica.units.dimensions.Dimension

Modifier and Type	Constant Field	Value
public static final int	N_BASE	7

etomica.util.*

etomica.util.Constants

Modifier and Type	Constant Field	Value
public static final double	AVOGADRO	6.02214076E23
public static final double	BOLTZMANN_K	0.8314462618153239
public static final double	G	1.1082935896038404E-31
public static final double	G_EARTH	9.8E-14
public static final double	LIGHT_SPEED	2997924.58
public static final double	RYDBERG_R	0.001097373156816
public static final double	TWO_PI	6.283185307179586

etomica.util.Debug

Modifier and Type	Constant Field	Value
public static final double	ATOM_SIZE	1.0
public static final int	ATOM1_INDEX	-1
public static final int	ATOM2_INDEX	-1
public static final int	BOX_INDEX	0
public static final int	MOLECULE1_INDEX	-1
public static final int	MOLECULE2_INDEX	-1
public static final boolean	ON	false
public static final int	SPECIES1_INDEX	0
public static final int	SPECIES2_INDEX	0

etomica.util.ScientificFormat

Modifier and Type	Constant Field	Value
protected static final java.lang.String	defdfmt	"#0.####;-#0.####"
protected static final java.lang.String	defefmt	"E+#0;E-#0"
public static final int	EXPONENT_FIELD	3

etomica.util.random.RandomMersenneTwister

Modifier and Type	Constant Field	Value
protected static final int	LOWER_MASK	2147483647
protected static final int	M	397
protected static final int	MATRIX_A	-1727483681
protected static final int	N	624
protected static final int	UPPER_MASK	-2147483648

etomica.virial.*

etomica.virial.ClusterChainHS

Modifier and Type	Constant Field	Value
public final boolean	old	true

etomica.virial.ClusterCoupledFlippedMultivalue

Modifier and Type	Constant Field	Value
protected final boolean	countflips	true

etomica.virial.ClusterICPYC

Modifier and Type	Constant Field	Value
protected final boolean	allPermutations	true

etomica.virial.ClusterSum

Modifier and Type	Constant Field	Value
protected static final boolean	debug	false

etomica.virial.ClusterSumMultibody

Modifier and Type	Constant Field	Value
protected final double	pushR2	0.0

etomica.virial.ClusterWheatleyPartitionScreening

Modifier and Type	Constant Field	Value
protected static final boolean	checkme	false
protected final boolean	doStatistics	false

etomica.virial.Conformation7SiteRigidSF6

Modifier and Type	Constant Field	Value
protected final double	bondL	1.565

etomica.virial.ConformationAnthracene3site

Modifier and Type	Constant Field	Value
protected static final double	bondlength	2.42

etomica.virial.ConformationAnthraceneTraPPE

Modifier and Type	Constant Field	Value
protected static final double	a	0.7
protected static final double	bond	1.4

etomica.virial.ConformationNaphthaleneTraPPE

Modifier and Type	Constant Field	Value
protected static final double	bondlength	1.4
protected static final double	halfofthebondlength	0.7

etomica.virial.ConformationPh3site

Modifier and Type	Constant Field	Value
protected static final double	bondlength	2.42
protected static final double	half_bondlength	1.21

etomica.virial.ConformationPhenanthreneTraPPE

Modifier and Type	Constant Field	Value
protected static final double	a	0.7
protected static final double	bond	1.4
protected static final double	fivea	3.5
protected static final double	foura	2.8

etomica.virial.MayerGeneral

Modifier and Type	Constant Field	Value
protected static final boolean	debug	false

etomica.virial.MCMoveClusterAtomHSRing

Modifier and Type	Constant Field	Value
protected static final double	fac10	1.2839372233185792E27
protected static final double	fac9	1.0850962247457077E23

etomica.virial.Species7SiteRigidSF6

Modifier and Type	Constant Field	Value
public static final int	indexF1	1
public static final int	indexF2	2
public static final int	indexF3	3
public static final int	indexF4	4
public static final int	indexF5	5
public static final int	indexF6	6
public static final int	indexS	0

etomica.virial.SpeciesAlkane

Modifier and Type	Constant Field	Value
public static final double	nominalBondL	1.54
public static final double	nominalBondTheta	1.9896753472735356

etomica.virial.SpeciesAnthracene3site545

Modifier and Type	Constant Field	Value
public static final int	indexC1	0
public static final int	indexCH1	1
public static final int	indexCH2	2

etomica.virial.SpeciesPh3site464

Modifier and Type	Constant Field	Value
public static final int	indexC1	0
public static final int	indexCH1	1
public static final int	indexCH2	2

etomica.virial.SpeciesPh3site545

Modifier and Type	Constant Field	Value
public static final int	indexC1	0
public static final int	indexCH1	1
public static final int	indexCH2	2

etomica.virial.SpeciesTraPPEAnthracene

Modifier and Type	Constant Field	Value
public static final int	indexC1	0
public static final int	indexC2	1
public static final int	indexC3	2
public static final int	indexC4	3
public static final int	indexCH1	4
public static final int	indexCH10	13
public static final int	indexCH2	5
public static final int	indexCH3	6
public static final int	indexCH4	7
public static final int	indexCH5	8
public static final int	indexCH6	9
public static final int	indexCH7	10
public static final int	indexCH8	11
public static final int	indexCH9	12

etomica.virial.SpeciesTraPPENaphthalene

Modifier and Type	Constant Field	Value
public static final int	indexC1	0
public static final int	indexC2	1
public static final int	indexCH1	2
public static final int	indexCH2	3
public static final int	indexCH3	4
public static final int	indexCH4	5
public static final int	indexCH5	6
public static final int	indexCH6	7
public static final int	indexCH7	8
public static final int	indexCH8	9

etomica.virial.SpeciesTraPPEPhenanthrene

Modifier and Type	Constant Field	Value
public static final int	indexC1	0
public static final int	indexC2	1
public static final int	indexC3	2
public static final int	indexC4	3
public static final int	indexCH1	4
public static final int	indexCH10	13
public static final int	indexCH2	5
public static final int	indexCH3	6
public static final int	indexCH4	7
public static final int	indexCH5	8
public static final int	indexCH6	9
public static final int	indexCH7	10
public static final int	indexCH8	11
public static final int	indexCH9	12

etomica.virial.cluster.ClusterOperations

Modifier and Type	Constant Field	Value
public static final int	HNC	2
public static final int	NONE	0
public static final int	PY	1

etomica.virial.cluster.VirialDiagrams

Modifier and Type	Constant Field	Value
protected final char	nodeColor	65

etomica.virial.cluster.VirialDiagramsMix

Modifier and Type	Constant Field	Value
protected final char	nodeColor	65

etomica.virial.cluster.VirialDiagramsPT

Modifier and Type	Constant Field	Value
protected final char	nodeColor	65

etomica.virial.simulations.VirialHS.VirialHSParam

Modifier and Type	Constant Field	Value
public static final int	CHAIN_TAIL	4
public static final int	CHAIN_TREE	5
public static final int	CHAINS	1
public static final int	CRINGS	6
public static final int	RING_CHAIN_TREES	9
public static final int	RING_TREE	7
public static final int	RINGS	8
public static final int	TREE	0

etomica.virial.simulations.VirialHSBinMultiThreaded.VirialHSBinParam

Modifier and Type	Constant Field	Value
public static final int	TREE	0
public static final int	TREE_CHAIN	1
public static final int	TREE_CHAIN_RING	2

etomica.virial.simulations.VirialHSMixture.VirialHSParam

Modifier and Type	Constant Field	Value
public static final int	CHAIN_TAIL	4
public static final int	CHAIN_TREE	5
public static final int	CHAINS	1
public static final int	CRINGS	6
public static final int	RANDOM	10
public static final int	RING_CHAIN_TREES	9
public static final int	RING_TREE	7
public static final int	RINGS	8
public static final int	TREE	0

etomica.virial.simulations.VirialN2

Modifier and Type	Constant Field	Value
public static final double	blN2	1.1014

etomica.virial.simulations.VirialN2PI

Modifier and Type	Constant Field	Value
public static final double	blN2	1.1014

etomica.virial.simulations.VirialPolyhedra.VirialHSParam

Modifier and Type	Constant Field	Value
public static final int	CHAIN_TREE	5
public static final int	CHAINS	1
public static final int	RING_CHAIN_TREES	9
public static final int	RING_TREE	7
public static final int	RINGS	8
public static final int	TREE	0

etomica.virial.simulations.VirialPolyhedra2.VirialHSParam

Modifier and Type	Constant Field	Value
public static final int	CHAIN_TREE	2
public static final int	CHAINS	1
public static final int	TREE	0

etomica.virial.simulations.VirialSWWE.VirialSWWEParam

Modifier and Type	Constant Field	Value
public static final int	CHAIN_TAIL	4
public static final int	CHAIN_TREE	5
public static final int	CHAINS	1
public static final int	CRINGS	6
public static final int	RING_CHAIN_TREES	9
public static final int	RING_TREE	7
public static final int	RINGS	8
public static final int	TREE	0

g3dsys.control.*

g3dsys.control.G3DSys

Modifier and Type	Constant Field	Value
public static final int	AXES	5
public static final int	BALL	0
public static final int	BOX	4
public static final int	CYLINDER	1
public static final int	LINE	3
public static final int	RECTANGLE	2
public static final int	TIMEDBALL	6

g3dsys.images.*

g3dsys.images.Bond

Modifier and Type	Constant Field	Value
public static final int	CYLINDER	0
public static final int	WIREFRAME	1

g3dsys.images.ImageShell

Modifier and Type	Constant Field	Value
public static final int	DRAW_EVERY_BOX	0
public static final int	DRAW_INNER_BOX	2
public static final int	DRAW_LARGE_BOX	1

org.jmol.*

org.jmol.constant.EnumStereoMode

Modifier and Type	Constant Field	Value
public static final int	DEFAULT_STEREO_DEGREES	-5

org.jmol.constant.StaticConstants

Modifier and Type	Constant Field	Value
public static final byte	PALETTE_ALTLOC	14
public static final byte	PALETTE_AMINO	8
public static final byte	PALETTE_CHAIN	10
public static final byte	PALETTE_CPK	1
public static final byte	PALETTE_ENERGY	19
public static final byte	PALETTE_FIXEDTEMP	5
public static final byte	PALETTE_FORMAL_CHARGE	3
public static final byte	PALETTE_GROUP	75
public static final byte	PALETTE_INSERTION	15
public static final byte	PALETTE_JMOL	16
public static final byte	PALETTE_MOLECULE	77
public static final byte	PALETTE_MONOMER	76
public static final byte	PALETTE_NONE	0
public static final byte	PALETTE_PARTIAL_CHARGE	2
public static final byte	PALETTE_POLYMER	87
public static final byte	PALETTE_PROPERTY	84
public static final byte	PALETTE_RASMOL	17
public static final byte	PALETTE_SHAPELY	9
public static final byte	PALETTE_STRAIGHTNESS	86
public static final byte	PALETTE_STRUCTURE	7
public static final byte	PALETTE_SURFACE	70
public static final byte	PALETTE_TEMP	68
public static final byte	PALETTE_TYPE	18
public static final byte	PALETTE_VARIABLE	85
public static final byte	PALETTE_VOLATILE	64

org.jmol.script.Token

Modifier and Type	Constant Field	Value
public static final int	adpmax	1112539137
public static final int	adpmin	1112539138
public static final int	all	1048579
public static final int	allfloat	256
public static final int	allowembeddedscripts	603979778
public static final int	allowgestures	603979780
public static final int	allowkeystrokes	603979781
public static final int	allowmodelkit	603979782
public static final int	allowmoveatoms	603979783
public static final int	allowmultitouch	603979784
public static final int	allowrotateselected	603979785
public static final int	altloc	1087373315
public static final int	ambientpercent	553648130
public static final int	angle	135266305
public static final int	animationfps	553648132
public static final int	antialiasdisplay	603979786
public static final int	antialiasimages	603979788
public static final int	antialiastranslucent	603979790
public static final int	appendnew	603979792
public static final int	appletproxy	545259522
public static final int	applysymmetrytobonds	603979794
public static final int	array	135266306
public static final int	atomid	1095761922
public static final int	atomindex	1095761923
public static final int	atomname	1087375362
public static final int	atomno	1095763969
public static final int	atompicking	603979796
public static final int	atomproperty	1078984704
public static final int	atoms	1141899265
public static final int	atomtype	1087375361
public static final int	atomtypes	545259524
public static final int	atomx	1112541185
public static final int	atomy	1112541186
public static final int	atomz	1112541187
public static final int	auto	1073741852
public static final int	autobond	603979798
public static final int	autofps	603979800
public static final int	average	96
public static final int	axes	1611272194
public static final int	axescolor	545259526
public static final int	axesmode	553648134
public static final int	axesmolecular	603979804
public static final int	axesorientationrasmol	603979806
public static final int	axesscale	570425346
public static final int	axesunitcell	603979808
public static final int	axeswindow	603979810
public static final int	axis	1073741854
public static final int	axis1color	545259528
public static final int	axis2color	545259530
public static final int	axis3color	545259532
public static final int	backbone	1115297793
public static final int	backgroundcolor	545259534
public static final int	backgroundmodel	536870914
public static final int	backlit	1073741862
public static final int	basepair	1073741864
public static final int	bitset	10
public static final int	bondcount	1095761924
public static final int	bondmodeor	603979812
public static final int	bondpicking	603979814
public static final int	bondradiusmilliangstroms	553648136
public static final int	bonds	1678770178
public static final int	bondtolerance	570425348
public static final int	booleanparam	603979776
public static final int	boundbox	1679429641
public static final int	boundboxcolor	545259536
public static final int	branch	1048580
public static final int	brillouin	1073741872
public static final int	cameradepth	570425350
public static final int	cap	1074790451
public static final int	carbohydrate	3145764
public static final int	cartoon	1113200642
public static final int	cartoonbaseedges	603979818
public static final int	cartoonfancy	603979820
public static final int	cartoonrockets	603979819
public static final int	cell	1095761925
public static final int	center	12289
public static final int	chain	1087373316
public static final int	chaincasesensitive	603979821
public static final int	clash	1073741881
public static final int	color	1766856708
public static final int	colorrasmol	603979822
public static final int	configuration	1095766022
public static final int	connect	4106
public static final int	connected	135266310
public static final int	contact	135402505
public static final int	contourlines	1073741898
public static final int	covalent	1112539139
public static final int	create	1073741904
public static final int	cross	135267329
public static final int	currentlocalpath	545259538
public static final int	data	135270407
public static final int	dataseparator	545259540
public static final int	debug	536870916
public static final int	debugscript	603979824
public static final int	decimal	3
public static final int	defaultanglelabel	545259542
public static final int	defaultcolorscheme	545259545
public static final int	defaultdirectory	545259546
public static final int	defaultdistancelabel	545259547
public static final int	defaultdrawarrowscale	570425352
public static final int	defaultdropscript	545259548
public static final int	defaultlabelpdb	545259543
public static final int	defaultlabelxyz	545259544
public static final int	defaultlattice	536870918
public static final int	defaultloadfilter	545259549
public static final int	defaultloadscript	545259550
public static final int	defaults	545259552
public static final int	defaultstructuredssp	603979825
public static final int	defaulttorsionlabel	545259554
public static final int	defaulttranslucent	570425354
public static final int	defaultvdw	545259555
public static final int	define	1060866
public static final int	delaymaximumms	553648138
public static final int	delete	12291
public static final int	depth	554176526
public static final int	diffusepercent	553648142
public static final int	dipole	135174
public static final int	dipolescale	570425356
public static final int	disablepopupmenu	603979826
public static final int	display	1610625028
public static final int	displaycellparameters	603979828
public static final int	distance	1276118018
public static final int	dna	3145732
public static final int	dotdensity	553648143
public static final int	dots	1113198595
public static final int	dotscale	553648144
public static final int	dotsselectedonly	603979829
public static final int	dotsurface	603979830
public static final int	dragselected	603979831
public static final int	draw	135176
public static final int	drawhover	603979832
public static final int	drawpicking	603979833
public static final int	dsspcalchydrogen	603979834
public static final int	dynamicmeasurements	603979835
public static final int	echo	537022465
public static final int	edsurlcutoff	545259556
public static final int	edsurlformat	545259557
public static final int	element	1087375365
public static final int	elemisono	1095761927
public static final int	elemno	1095763976
public static final int	ellipsoid	1113198596
public static final int	ellipsoidarcs	603979836
public static final int	ellipsoidaxes	603979837
public static final int	ellipsoidaxisdiameter	570425358
public static final int	ellipsoidball	603979838
public static final int	ellipsoiddotcount	553648145
public static final int	ellipsoiddots	603979839
public static final int	ellipsoidfill	603979840
public static final int	energyunits	545259558
public static final int	eta	1112539140
public static final int	file	1229984263
public static final int	filecachedirectory	545259559
public static final int	filecaching	603979842
public static final int	fill	1073741938
public static final int	first	1073741942
public static final int	floatparam	570425344
public static final int	floatproperty	1112539136
public static final int	fontcaching	603979844
public static final int	fontscaling	603979845
public static final int	forceautobond	603979846
public static final int	forcefield	545259560
public static final int	formalcharge	1632634889
public static final int	format	1288701960
public static final int	fractionalrelative	603979848
public static final int	fracx	1112541188
public static final int	fracxyz	1146095627
public static final int	fracy	1112541189
public static final int	fracz	1112541190
public static final int	frank	1611272202
public static final int	front	1073741954
public static final int	frontlit	1073741958
public static final int	frontonly	1073741960
public static final int	full	1073741961
public static final int	fullylit	1073741964
public static final int	fux	1112541191
public static final int	fuxyz	1146095629
public static final int	fuy	1112541192
public static final int	fuz	1112541193
public static final int	geosurface	1113198597
public static final int	gestureswipefactor	570425359
public static final int	greyscalerendering	603979850
public static final int	group	1087373318
public static final int	group1	1087373319
public static final int	groupid	1095761930
public static final int	groupindex	1095761931
public static final int	halo	1113200646
public static final int	hbond	1612189718
public static final int	hbondsangleminimum	570425360
public static final int	hbondsbackbone	603979852
public static final int	hbondsdistancemaximum	570425361
public static final int	hbondsrasmol	603979853
public static final int	hbondssolid	603979854
public static final int	helix	137363468
public static final int	helixstep	553648146
public static final int	helppath	545259561
public static final int	hermitelevel	553648147
public static final int	hetero	1613758470
public static final int	hidenameinpopup	603979858
public static final int	hidenavigationpoint	603979860
public static final int	hidenotselected	603979862
public static final int	highlight	536870920
public static final int	highresolution	603979864
public static final int	historylevel	553648148
public static final int	hover	544771
public static final int	hoverdelay	570425362
public static final int	hoverlabel	545259562
public static final int	hydrogen	1613758476
public static final int	hydrophobic	1114638346
public static final int	identifier	1073741824
public static final int	identify	1087373321
public static final int	imagestate	603979868
public static final int	info	1073741982
public static final int	insertion	1087373322
public static final int	integer	2
public static final int	intermolecular	1073741990
public static final int	intparam	553648128
public static final int	intproperty	1095761920
public static final int	intramolecular	1073741989
public static final int	ionic	1112541195
public static final int	isaromatic	1048585
public static final int	iskiosk	603979869
public static final int	isosurface	135180
public static final int	isosurfacekey	603979870
public static final int	isosurfacepropertysmoothing	603979871
public static final int	isosurfacepropertysmoothingpower	553648149
public static final int	jmol	1073741992
public static final int	justifymeasurements	603979872
public static final int	label	1826248715
public static final int	language	545259564
public static final int	languagetranslation	603979873
public static final int	last	1073741993
public static final int	lcaocartoon	135182
public static final int	left	1073741996
public static final int	legacyautobonding	603979874
public static final int	list	1073742001
public static final int	loadatomdatatolerance	570425363
public static final int	loadformat	545259565
public static final int	loadligandformat	545259566
public static final int	logcommands	603979875
public static final int	logfile	545259567
public static final int	loggestures	603979876
public static final int	loglevel	553648150
public static final int	mass	1112539141
public static final int	matrix3f	11
public static final int	matrix4f	12
public static final int	max	64
public static final int	measure	1746538509
public static final int	measureallmodels	603979877
public static final int	measurementlabels	603979878
public static final int	measurements	537006096
public static final int	measurementunits	545259568
public static final int	mesh	1073742018
public static final int	meshRibbon	1113200647
public static final int	meshscale	553648151
public static final int	messagestylechime	603979879
public static final int	min	32
public static final int	minbonddistance	570425364
public static final int	minimizationcriterion	570425365
public static final int	minimizationrefresh	603979880
public static final int	minimizationsilent	603979881
public static final int	minimizationsteps	553648152
public static final int	minpixelselradius	553648153
public static final int	mo	1183762
public static final int	model	1095766028
public static final int	modelindex	1095761933
public static final int	modelkitmode	603979882
public static final int	modify	1073742025
public static final int	modifyorcreate	1073742026
public static final int	molecule	1095761934
public static final int	monitorenergy	603979883
public static final int	mousedragfactor	570425366
public static final int	mousewheelfactor	570425367
public static final int	moveto	4130
public static final int	multiplebondradiusfactor	570425368
public static final int	multiplebondspacing	570425369
public static final int	multiprocessor	603979884
public static final int	nada	0
public static final int	navfps	570425370
public static final int	navigate	4131
public static final int	navigatesurface	603979885
public static final int	navigationdepth	570425371
public static final int	navigationmode	603979886
public static final int	navigationperiodic	603979887
public static final int	navigationslab	570425372
public static final int	navigationspeed	570425374
public static final int	navx	570425376
public static final int	navy	570425378
public static final int	navz	570425380
public static final int	nci	1073742036
public static final int	next	1073742037
public static final int	nmrurlformat	545259569
public static final int	nocontourlines	1073742039
public static final int	nodots	1073742042
public static final int	nofill	1073742046
public static final int	nomesh	1073742052
public static final int	none	1048587
public static final int	notfrontonly	1073742058
public static final int	notriangles	1073742060
public static final int	nucleic	3145742
public static final int	occupancy	1129318401
public static final int	off	1048588
public static final int	omega	1112539142
public static final int	on	1048589
public static final int	opEQ	269484436
public static final int	opToggle	269484114
public static final int	partialcharge	1112541196
public static final int	partialdots	603979888
public static final int	path	1073742084
public static final int	pathforallfiles	545259570
public static final int	pause	20487
public static final int	pdbaddhydrogens	603979889
public static final int	pdbgetheader	603979890
public static final int	pdbsequential	603979891
public static final int	percent	269484210
public static final int	percentvdwatom	553648154
public static final int	perspectivedepth	603979892
public static final int	perspectivemodel	553648155
public static final int	phi	1112539143
public static final int	phongexponent	553648156
public static final int	picking	545259572
public static final int	pickingspinrate	553648158
public static final int	pickingstyle	545259574
public static final int	picklabel	545259576
public static final int	plane	135266319
public static final int	play	1073742096
public static final int	playrev	1073742098
public static final int	plot3d	135190
public static final int	pmesh	135188
public static final int	point	135266320
public static final int	pointgroupdistancetolerance	570425382
public static final int	pointgrouplineartolerance	570425384
public static final int	polyhedra	135192
public static final int	polymer	1095761935
public static final int	polymerlength	1095761936
public static final int	preservestate	603979893
public static final int	prev	1073742108
public static final int	probe	1073742109
public static final int	property	1716520973
public static final int	propertyatomnumbercolumncount	553648160
public static final int	propertyatomnumberfield	553648159
public static final int	propertycolorscheme	545259578
public static final int	propertydatacolumncount	553648162
public static final int	propertydatafield	553648164
public static final int	PROPERTYFLAGS	1137704960
public static final int	protein	3145744
public static final int	psi	1112539144
public static final int	purine	3145746
public static final int	pyrimidine	3145748
public static final int	quaternionframe	545259580
public static final int	radius	1666189314
public static final int	range	1073742114
public static final int	rangeselected	603979894
public static final int	rasmol	1073742116
public static final int	redomove	4139
public static final int	refreshing	603979896
public static final int	repaintwaitms	553648165
public static final int	residue	1073742120
public static final int	resno	1095761937
public static final int	resume	266287
public static final int	reverse	1141899269
public static final int	rewind	1073742126
public static final int	ribbon	1113200649
public static final int	ribbonaspectratio	553648166
public static final int	ribbonborder	603979898
public static final int	right	1073742128
public static final int	rna	3145750
public static final int	rocket	1113200650
public static final int	rocketbarrels	603979900
public static final int	rotate	528432
public static final int	rotation	1073742132
public static final int	rotationradius	570425388
public static final int	sasurface	1073742136
public static final int	save	4146
public static final int	saveproteinstructurestate	603979902
public static final int	scaleangstromsperinch	570425390
public static final int	screenx	1112539145
public static final int	screenxyz	1146095628
public static final int	screeny	1112539146
public static final int	screenz	1112539147
public static final int	scriptCommand	4096
public static final int	scriptqueue	603979904
public static final int	scriptreportinglevel	553648168
public static final int	selectallmodels	603979906
public static final int	selected	1114638350
public static final int	selectedfloat	224
public static final int	selecthetero	603979908
public static final int	selecthydrogen	603979910
public static final int	selectionhalos	1611141171
public static final int	sequence	1087373320
public static final int	shape	1087373323
public static final int	sheet	3145760
public static final int	sheetsmoothing	570425392
public static final int	showaxes	603979914
public static final int	showboundbox	603979916
public static final int	showfrank	603979918
public static final int	showhiddenselectionhalos	603979920
public static final int	showhydrogens	603979922
public static final int	showkeystrokes	603979924
public static final int	showmeasurements	603979926
public static final int	showmultiplebonds	603979928
public static final int	shownavigationpointalways	603979930
public static final int	showscript	536870922
public static final int	showtiming	603979934
public static final int	showunitcell	603979936
public static final int	sidechain	3145754
public static final int	site	1095761938
public static final int	slab	554176565
public static final int	slabbyatom	603979938
public static final int	slabbymolecule	603979940
public static final int	slabenabled	603979942
public static final int	slabrange	570425393
public static final int	smallmoleculemaxatoms	553648170
public static final int	smartaromatic	603979944
public static final int	smiles2dimageformat	545259584
public static final int	smilesurlformat	545259582
public static final int	solvent	1613758488
public static final int	solventprobe	603979948
public static final int	solventproberadius	570425394
public static final int	spacefill	1113200651
public static final int	spec_alternate	1048607
public static final int	spec_atom	1048608
public static final int	spec_chain	1048609
public static final int	spec_model	1048610
public static final int	spec_name_pattern	1048612
public static final int	spec_resid	1048613
public static final int	spec_seqcode	1048614
public static final int	spec_seqcode_range	1048615
public static final int	specialposition	3145772
public static final int	specular	536870924
public static final int	specularexponent	553648172
public static final int	specularpercent	553648174
public static final int	specularpower	553648176
public static final int	sphere	1073742154
public static final int	spine	3145762
public static final int	spinfps	570425396
public static final int	spinx	570425398
public static final int	spiny	570425400
public static final int	spinz	570425402
public static final int	ssbond	1611141176
public static final int	ssbondsbackbone	603979952
public static final int	star	1113200652
public static final int	statusreporting	603979954
public static final int	stddev	192
public static final int	stereodegrees	570425404
public static final int	straightness	1112539148
public static final int	strandcount	553648178
public static final int	strandcountformeshribbon	553648180
public static final int	strandcountforstrands	553648182
public static final int	strands	1650071565
public static final int	string	4
public static final int	strparam	545259520
public static final int	strproperty	1087373312
public static final int	strucid	1087373324
public static final int	strucno	1095761939
public static final int	structure	1641025539
public static final int	strutdefaultradius	570425406
public static final int	strutlengthmaximum	570425408
public static final int	struts	1708058
public static final int	strutsmultiple	603979955
public static final int	strutspacing	553648184
public static final int	substructure	1238369286
public static final int	sum	128
public static final int	sum2	160
public static final int	surface	3145756
public static final int	surfacedistance	1112539149
public static final int	symbol	1087375373
public static final int	symmetry	1089470478
public static final int	symop	1297090050
public static final int	syncmouse	603979956
public static final int	syncscript	603979958
public static final int	temperature	1112541199
public static final int	testflag1	603979960
public static final int	testflag2	603979962
public static final int	testflag3	603979964
public static final int	testflag4	603979966
public static final int	theta	1112539150
public static final int	trace	1113200654
public static final int	tracealpha	603979967
public static final int	trajectory	536870926
public static final int	translate	4160
public static final int	translation	1073742178
public static final int	translucent	1073742180
public static final int	triangles	1073742182
public static final int	trim	1276117510
public static final int	trycmd	364558
public static final int	type	1141899272
public static final int	undo	536870928
public static final int	undomove	4165
public static final int	unitcell	1614417948
public static final int	unitcellcolor	545259586
public static final int	unitx	1112539151
public static final int	unitxyz	1146093582
public static final int	unity	1112539152
public static final int	unitz	1112539153
public static final int	usearcball	603979969
public static final int	useminimizationthread	603979970
public static final int	usenumberlocalization	603979972
public static final int	usercolorscheme	536870930
public static final int	valence	1095763988
public static final int	vanderwaals	1649412112
public static final int	vector	135198
public static final int	vectorscale	1649410065
public static final int	vectorsymmetry	603979973
public static final int	vibration	4166
public static final int	vibrationperiod	570425412
public static final int	vibrationscale	570425414
public static final int	vibx	1112541202
public static final int	vibxyz	1146095631
public static final int	viby	1112541203
public static final int	vibz	1112541204
public static final int	visualrange	570425416
public static final int	volume	1313866247
public static final int	waitformoveto	603979974
public static final int	windowcentered	603979975
public static final int	wireframe	659488
public static final int	wireframerotation	603979976
public static final int	within	135266324
public static final int	x	1112541205
public static final int	xyz	1146095626
public static final int	y	1112541206
public static final int	z	1112541207
public static final int	zdepth	553648186
public static final int	zerobasedxyzrasmol	603979978
public static final int	zoomenabled	603979980
public static final int	zoomlarge	603979982
public static final int	zshade	603979984
public static final int	zshadepower	553648190
public static final int	zslab	553648188

org.jmol.util.Colix

Modifier and Type	Constant Field	Value
public static final int	ALPHA_SHIFT	13
public static final short	BLACK	4
public static final short	BLUE	7
public static final short	CHANGEABLE_MASK	-32768
public static final short	CYAN	9
public static final short	GOLD	23
public static final short	GRAY	12
public static final short	GREEN	11
public static final short	HOTPINK	22
public static final short	INHERIT_ALL	0
public static final short	INHERIT_COLOR	1
public static final int	LAST_AVAILABLE_COLIX	2047
public static final short	LIME	14
public static final short	MAGENTA	20
public static final short	MAROON	15
public static final short	NAVY	16
public static final short	OLIVE	17
public static final short	OPAQUE_MASK	-30721
public static final short	ORANGE	5
public static final short	PINK	6
public static final short	PURPLE	18
public static final short	RAW_RGB	3
public static final short	RED	10
public static final short	SILVER	13
public static final short	SPECIAL_COLIX_MAX	4
public static final short	TEAL	19
public static final int	TRANSLUCENT_50	8192
public static final int	TRANSLUCENT_MASK	30720
public static final int	TRANSLUCENT_SCREENED	30720
public static final int	TRANSLUCENT_SHIFT	11
public static final int	TRANSPARENT	16384
public static final short	UNMASK_CHANGEABLE_TRANSLUCENT	2047
public static final short	USE_PALETTE	2
public static final short	WHITE	8
public static final short	YELLOW	21

org.jmol.util.Elements

Modifier and Type	Constant Field	Value
public static final int	firstIsotope	4
public static final int	FORMAL_CHARGE_MAX	7
public static final int	FORMAL_CHARGE_MIN	-4
public static final java.lang.String	VdwPROBE	"#VDW radii for PROBE;{_H}.vdw = 1.0;{_H and connected(_C) and not connected(within(smiles,\'[a]\'))}.vdw = 1.17;{_C}.vdw = 1.75;{_C and connected(3) and connected(_O)}.vdw = 1.65;{_N}.vdw = 1.55;{_O}.vdw = 1.4;{_P}.vdw = 1.8;{_S}.vdw = 1.8;message VDW radii for H, C, N, O, P, and S set according to Word, et al., J. Mol. Biol. (1999) 285, 1711-1733"

org.jmol.util.GData

Modifier and Type	Constant Field	Value
public static final byte	ENDCAPS_FLAT	2
public static final byte	ENDCAPS_NONE	0
public static final byte	ENDCAPS_OPEN	1
public static final byte	ENDCAPS_OPENEND	4
public static final byte	ENDCAPS_SPHERICAL	3
public static final int	EXPORT_CARTESIAN	1
public static final int	EXPORT_NOT	0
public static final int	EXPORT_RAYTRACER	2
public static final int	xGT	4
public static final int	xLT	8
public static final int	yGT	1
public static final int	yLT	2
public static final int	zGT	16
public static final int	zLT	32

org.jmol.util.Geodesic

Modifier and Type	Constant Field	Value
public static final int	standardLevel	3

org.jmol.util.JmolFont

Modifier and Type	Constant Field	Value
public static final int	FONT_FACE_MONO	2
public static final int	FONT_FACE_SANS	0
public static final int	FONT_FACE_SERIF	1
public static final int	FONT_STYLE_BOLD	1
public static final int	FONT_STYLE_BOLDITALIC	3
public static final int	FONT_STYLE_ITALIC	2
public static final int	FONT_STYLE_PLAIN	0

org.jmol.util.Logger

Modifier and Type	Constant Field	Value
public static final int	LEVEL_DEBUG	5
public static final int	LEVEL_DEBUGHIGH	6
public static final int	LEVEL_ERROR	2
public static final int	LEVEL_FATAL	1
public static final int	LEVEL_INFO	4
public static final int	LEVEL_MAX	7
public static final int	LEVEL_WARN	3

org.jmol.util.Measure

Modifier and Type	Constant Field	Value
public static final float	radiansPerDegree	0.01745329238474369f

org.jmol.util.MeshSurface

Modifier and Type	Constant Field	Value
protected static final int	SEED_COUNT	25

org.jmol.util.Normix

Modifier and Type	Constant Field	Value
public static final short	NORMIX_NULL	9999

org.jmol.util.Shader

Modifier and Type	Constant Field	Value
public static final int	maxSphereCache	128
public static final int	shadeIndexLast	63
public static final int	shadeIndexMax	64
public static final byte	shadeIndexNoisyLimit	56
public static final byte	shadeIndexNormal	52

org.jmol.viewer.JmolConstants

Modifier and Type	Constant Field	Value
public static final java.lang.String	ADD_HYDROGEN_TITLE	"Viewer.AddHydrogens"
public static final java.lang.String	allowedQuaternionFrames	"RC;RP;a;b;c;n;p;q;x;"
public static final float	ANGSTROMS_PER_BOHR	0.529177188873291f
public static final int	argbShapelyBackbone	-4671304
public static final int	argbShapelyDefault	-65281
public static final int	argbShapelySpecial	-10616738
public static final int	argbsIsosurfaceNegative	-6283184
public static final int	argbsIsosurfacePositive	-11525984
public static final int	ATOM_IN_FRAME	1
public static final int	ATOM_SLABBED	2
public static final byte	ATOMID_ALPHA_CARBON	2
public static final int	ATOMID_ALPHA_ONLY_MASK	4
public static final byte	ATOMID_AMINO_NITROGEN	1
public static final byte	ATOMID_C1_PRIME	12
public static final byte	ATOMID_C2	33
public static final byte	ATOMID_C3_PRIME	9
public static final byte	ATOMID_C4	35
public static final byte	ATOMID_C4_PRIME	8
public static final byte	ATOMID_C5	36
public static final byte	ATOMID_C5M	45
public static final byte	ATOMID_C6	37
public static final byte	ATOMID_C7	49
public static final byte	ATOMID_C8	40
public static final byte	ATOMID_CARBONYL_CARBON	3
public static final byte	ATOMID_CARBONYL_OD1	14
public static final byte	ATOMID_CARBONYL_OD2	15
public static final byte	ATOMID_CARBONYL_OE1	16
public static final byte	ATOMID_CARBONYL_OE2	17
public static final byte	ATOMID_CARBONYL_OXYGEN	4
public static final int	ATOMID_DISTINGUISHING_ATOM_MAX	14
public static final byte	ATOMID_H3T_TERMINUS	88
public static final byte	ATOMID_H5T_TERMINUS	72
public static final byte	ATOMID_HO3_PRIME	89
public static final byte	ATOMID_HO5_PRIME	90
public static final byte	ATOMID_N1	32
public static final byte	ATOMID_N2	43
public static final byte	ATOMID_N3	34
public static final byte	ATOMID_N4	42
public static final byte	ATOMID_N6	44
public static final byte	ATOMID_N7	39
public static final byte	ATOMID_N9	41
public static final int	ATOMID_NUCLEIC_MASK	8128
public static final byte	ATOMID_NUCLEIC_PHOSPHORUS	13
public static final byte	ATOMID_O1	5
public static final byte	ATOMID_O1P	74
public static final byte	ATOMID_O2	38
public static final byte	ATOMID_O2_PRIME	79
public static final byte	ATOMID_O2P	76
public static final byte	ATOMID_O3_PRIME	10
public static final byte	ATOMID_O4	47
public static final byte	ATOMID_O5_PRIME	6
public static final byte	ATOMID_O5T_TERMINUS	73
public static final byte	ATOMID_O6	46
public static final byte	ATOMID_OP1	75
public static final byte	ATOMID_OP2	77
public static final int	ATOMID_PHOSPHORUS_ONLY_MASK	8192
public static final int	ATOMID_PROTEIN_MASK	14
public static final byte	ATOMID_S4	48
public static final byte	ATOMID_SG	18
public static final byte	ATOMID_TERMINATING_OXT	64
public static final int	AXES_DEFAULT_FONTSIZE	14
public static final java.lang.String	binaryExtensions	";pse=PyMOL;"
public static final java.lang.String	CLASSBASE_OPTIONS	"org.jmol."
public static final java.lang.String	copyright	"(C) 2012 Jmol Development"
public static final int	CURSOR_CROSSHAIR	2
public static final int	CURSOR_DEFAULT	0
public static final int	CURSOR_HAND	1
public static final int	CURSOR_MOVE	3
public static final int	CURSOR_WAIT	4
public static final int	CURSOR_ZOOM	5
public static final short	DEFAULT_BOND_MILLIANGSTROM_RADIUS	150
public static final float	DEFAULT_BOND_RADIUS	0.15000000596046448f
public static final float	DEFAULT_BOND_TOLERANCE	0.44999998807907104f
public static final java.lang.String	DEFAULT_FONTFACE	"SansSerif"
public static final java.lang.String	DEFAULT_FONTSTYLE	"Plain"
public static final java.lang.String	DEFAULT_HELP_PATH	"http://chemapps.stolaf.edu/jmol/docs/index.htm"
public static final float	DEFAULT_MAX_CONNECT_DISTANCE	1.0E8f
public static final float	DEFAULT_MIN_BOND_DISTANCE	0.4000000059604645f
public static final float	DEFAULT_MIN_CONNECT_DISTANCE	0.10000000149011612f
public static final int	DEFAULT_PERCENT_VDW_ATOM	23
public static final float	DEFAULT_STRUT_RADIUS	0.30000001192092896f
public static final java.lang.String	EMBEDDED_SCRIPT_TAG	"**** Jmol Embedded Script ****"
public static final java.lang.String	EXPORT_DRIVER_LIST	"Idtf;Maya;Povray;Vrml;X3d;Tachyon;Obj"
public static final int	FORMAL_CHARGE_INDEX_WHITE	4
public static final int	FORMAL_CHARGE_RANGE_SIZE	12
public static final int	GROUPID_AMINO_MAX	24
public static final int	GROUPID_ARGININE	2
public static final int	GROUPID_ASPARAGINE	3
public static final int	GROUPID_ASPARTATE	4
public static final int	GROUPID_CYSTEINE	5
public static final int	GROUPID_GLUTAMATE	7
public static final int	GROUPID_GLUTAMINE	6
public static final int	GROUPID_HISTIDINE	9
public static final int	GROUPID_LYSINE	12
public static final int	GROUPID_NUCLEIC_MAX	42
public static final int	GROUPID_PROLINE	15
public static final int	GROUPID_TRYPTOPHAN	19
public static final int	LABEL_DEFAULT_FONTSIZE	13
public static final int	LABEL_DEFAULT_X_OFFSET	4
public static final int	LABEL_DEFAULT_Y_OFFSET	4
public static final int	LABEL_MAXIMUM_FONTSIZE	63
public static final int	LABEL_MINIMUM_FONTSIZE	6
public static final java.lang.String	LOAD_ATOM_DATA_TYPES	"xyz;vxyz;vibration;temperature;occupancy;partialcharge"
public static final short	madMultipleBondSmallMaximum	500
public static final int	MAXIMUM_AUTO_BOND_COUNT	20
public static final int	MEASURE_DEFAULT_FONTSIZE	15
public static final int	MINIMIZATION_ATOM_MAX	200
public static final float	MINIMIZE_FIXED_RANGE	5.0f
public static final java.lang.String	MODELKIT_ZAP_STRING	"1 0 C 0 0"
public static final java.lang.String	MODELKIT_ZAP_TITLE	"Jmol Model Kit"
public static final int	MOUSE_NONE	-1
public static final byte	MULTIBOND_ALWAYS	3
public static final byte	MULTIBOND_NEVER	0
public static final byte	MULTIBOND_NOTSMALL	2
public static final byte	MULTIBOND_WIREFRAME	1
public static final java.lang.String	NOTE_SCRIPT_FILE	"NOTE: file recognized as a script file: "
public static final boolean	officialRelease	false
public static final int	PARTIAL_CHARGE_RANGE_SIZE	31
public static final float	radiansPerDegree	0.01745329238474369f
public static final java.lang.String	SCRIPT_EDITOR_IGNORE	"\u0001## EDITOR_IGNORE ##"
public static final int	SHAPE_AXES	30
public static final int	SHAPE_BACKBONE	9
public static final int	SHAPE_BALLS	0
public static final int	SHAPE_BBCAGE	31
public static final int	SHAPE_CARTOON	11
public static final int	SHAPE_CONTACT	24
public static final int	SHAPE_DIPOLES	17
public static final int	SHAPE_DOTS	16
public static final int	SHAPE_DRAW	22
public static final int	SHAPE_ECHO	29
public static final int	SHAPE_ELLIPSOIDS	20
public static final int	SHAPE_FRANK	34
public static final int	SHAPE_GEOSURFACE	19
public static final int	SHAPE_HALOS	8
public static final int	SHAPE_HOVER	33
public static final int	SHAPE_HSTICKS	2
public static final int	SHAPE_ISOSURFACE	23
public static final int	SHAPE_LABELS	5
public static final int	SHAPE_LCAOCARTOON	25
public static final int	SHAPE_MAX	35
public static final int	SHAPE_MAX_HAS_ID	30
public static final int	SHAPE_MAX_MESH_COLLECTION	29
public static final int	SHAPE_MAX_SECONDARY	16
public static final int	SHAPE_MAX_SIZE_ZERO_ON_RESTRICT	21
public static final int	SHAPE_MAX_SPECIAL	23
public static final int	SHAPE_MAX_SURFACE	29
public static final int	SHAPE_MEASURES	6
public static final int	SHAPE_MESHRIBBON	13
public static final int	SHAPE_MIN_HAS_ID	22
public static final int	SHAPE_MIN_MESH_COLLECTION	22
public static final int	SHAPE_MIN_SECONDARY	9
public static final int	SHAPE_MIN_SPECIAL	16
public static final int	SHAPE_MIN_SURFACE	23
public static final int	SHAPE_MO	26
public static final int	SHAPE_PLOT3D	28
public static final int	SHAPE_PMESH	27
public static final int	SHAPE_POLYHEDRA	21
public static final int	SHAPE_RIBBONS	14
public static final int	SHAPE_ROCKETS	15
public static final int	SHAPE_SSSTICKS	3
public static final int	SHAPE_STARS	7
public static final int	SHAPE_STICKS	1
public static final int	SHAPE_STRANDS	12
public static final int	SHAPE_STRUTS	4
public static final int	SHAPE_TRACE	10
public static final int	SHAPE_UCCAGE	32
public static final int	SHAPE_VECTORS	18
public static final int	XY_ZTOP	100