Package etomica.normalmode

Class SimLJHTTISuperSFMD

java.lang.Object

etomica.simulation.Simulation

etomica.normalmode.SimLJHTTISuperSFMD

public class SimLJHTTISuperSFMD
extends Simulation

Nested Class Summary

Nested Classes

Modifier and Type	Class	Description
static class	SimLJHTTISuperSFMD.SimOverlapParam	Inner class for parameters understood by the HSMD3D constructor

Field Summary

Fields

Modifier and Type	Field	Description
Basis	basis
Boundary	boundary
Box	box
CoordinateDefinition	coordinateDefinition
IntegratorMD	integrator
int[]	nCells
Potential2SoftSpherical	potential
PotentialMasterList	potentialMaster
Primitive	primitive
SpeciesGeneral	species

Fields inherited from class etomica.simulation.Simulation

eventManager, random, seeds, space

Constructor Summary

Constructors

Constructor	Description
SimLJHTTISuperSFMD(Space _space, int numAtoms, double density, double temperature, double rc, int[] seeds)

Method Summary

Modifier and Type	Method	Description
void	initialize(long initSteps)
static void	main(java.lang.String[] args)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from class etomica.simulation.Simulation

addBox, addSpecies, box, getBox, getBoxCount, getBoxes, getController, getEventManager, getIntegrator, getRandom, getRandomSeeds, getSpace, getSpecies, getSpeciesCount, getSpeciesList, makeBox, makeBox, makeUniqueElementSymbol, removeBox, setRandom, species

Field Detail

coordinateDefinition

public final CoordinateDefinition coordinateDefinition

integrator

public IntegratorMD integrator

box

public Box box

boundary

public Boundary boundary

nCells

public int[] nCells

basis

public Basis basis

primitive

public Primitive primitive

potentialMaster

public PotentialMasterList potentialMaster

potential

public Potential2SoftSpherical potential

species

public SpeciesGeneral species

Constructor Detail

SimLJHTTISuperSFMD

public SimLJHTTISuperSFMD(Space _space,
                          int numAtoms,
                          double density,
                          double temperature,
                          double rc,
                          int[] seeds)

Method Detail

main

public static void main(java.lang.String[] args)

Parameters:

args - filename containing simulation parameters

initialize

public void initialize(long initSteps)