Package etomica.modules.chainequilibrium

Class MeterConversion

java.lang.Object

etomica.data.DataSourceScalar

etomica.modules.chainequilibrium.MeterConversion

All Implemented Interfaces:

IDataSource

public class MeterConversion
extends DataSourceScalar

Meter for the reaction conversion (fraction of reacted sites).

Field Summary

Fields

Modifier and Type	Field	Description
protected AtomLeafAgentManager	agentManager
protected Box	box
protected int	nReacted
protected ISpecies[]	species
protected int	total

Fields inherited from class etomica.data.DataSourceScalar

data, dataInfo, tag

Constructor Summary

Constructors

Constructor	Description
MeterConversion(Box box, AtomLeafAgentManager agentManager)

Method Summary

Modifier and Type	Method	Description
protected void	calcConversion(IMoleculeList monomerList)
double	getDataAsScalar()	Returns a single scalar value as the measurement for the given box.
void	setSpecies(ISpecies[] newSpecies)

Methods inherited from class etomica.data.DataSourceScalar

getData, getDataDouble, getDataInfo, getTag

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

agentManager

protected final AtomLeafAgentManager agentManager

species

protected ISpecies[] species

box

protected final Box box

total

protected int total

nReacted

protected int nReacted

Constructor Detail

MeterConversion

public MeterConversion(Box box,
                       AtomLeafAgentManager agentManager)

Method Detail

setSpecies

public void setSpecies(ISpecies[] newSpecies)

getDataAsScalar

public double getDataAsScalar()

Description copied from class: DataSourceScalar

Returns a single scalar value as the measurement for the given box. Subclasses define this method to specify the measurement they make.

Specified by:

getDataAsScalar in class DataSourceScalar

calcConversion

protected void calcConversion(IMoleculeList monomerList)