Package etomica.modules.chainequilibrium

Class ConfigurationLatticeFreeRadical

java.lang.Object

etomica.config.ConfigurationLattice

etomica.modules.chainequilibrium.ConfigurationLatticeFreeRadical

All Implemented Interfaces:

Configuration

public class ConfigurationLatticeFreeRadical
extends ConfigurationLattice

Configuration that puts atoms randomly on a lattice and groups pairs of initiator atoms together as though they are a single molecule.

See Also:

Serialized Form

Nested Class Summary

Nested classes/interfaces inherited from class etomica.config.ConfigurationLattice

ConfigurationLattice.MyLattice

Field Summary

Fields

Modifier and Type	Field	Description
protected IRandom	random
protected ISpecies	speciesInitiator
protected ISpecies	speciesMonomer

Fields inherited from class etomica.config.ConfigurationLattice

atomActionTranslateTo, boundaryPadding, indexIterator, lattice, myLat, positionDefinition, rescalingToFitVolume, space

Constructor Summary

Constructors

Constructor	Description
ConfigurationLatticeFreeRadical(SpaceLattice lattice, Space space, IRandom random)

Method Summary

Modifier and Type	Method	Description
void	initializeCoordinates(Box box)	Places the molecules in the given box on the positions of the lattice.
void	setSpecies(ISpecies speciesInitiator, ISpecies speciesMonomer)

Methods inherited from class etomica.config.ConfigurationLattice

calculateLatticeDimensions, getBoundaryPadding, getLatticeMemento, initializeCoordinates, isRescalingToFitVolume, setBoundaryPadding, setRescalingToFitVolume

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

speciesInitiator

protected ISpecies speciesInitiator

speciesMonomer

protected ISpecies speciesMonomer

random

protected final IRandom random

Constructor Detail

ConfigurationLatticeFreeRadical

public ConfigurationLatticeFreeRadical(SpaceLattice lattice,
                                       Space space,
                                       IRandom random)

Method Detail

setSpecies

public void setSpecies(ISpecies speciesInitiator,
                       ISpecies speciesMonomer)

initializeCoordinates

public void initializeCoordinates(Box box)

Places the molecules in the given box on the positions of the lattice.

Specified by:

initializeCoordinates in interface Configuration

Overrides:

initializeCoordinates in class ConfigurationLattice