Package etomica.meta.wrappers

Class SimulationWrapper

java.lang.Object

etomica.meta.wrappers.Wrapper<T>

etomica.meta.wrappers.ObjectWrapper<Simulation>

etomica.meta.wrappers.SimulationWrapper

public class SimulationWrapper
extends ObjectWrapper<Simulation>

Specialized wrapper for Simulations. When a wrapper is created it collects the PotentialMasters in a simulation, which are associated with Integrators internally but conceptually are children of the simulation, and adds a "synthetic" method to return them to the list of the simulation's properties.

Field Summary

Fields inherited from class etomica.meta.wrappers.Wrapper

childProps, doSerialize, simModel, valueProps, wrapped, wrappedClass, wrappedId

Constructor Summary

Constructors

Constructor	Description
SimulationWrapper(Simulation wrapped, SimulationModel simModel, boolean doSerialize)

Method Summary

Modifier and Type	Method	Description
double[][][]	getAllCoordinates()	Array of coordinates of all atoms in all boxes in the wrapped Simulation.
PotentialMaster[]	getPotentialMasters()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from class etomica.meta.wrappers.Wrapper

doSerialize, getChildProperties, getValueProperties, getValues, getWrapped, getWrappedClass, getWrappedId

Constructor Detail

SimulationWrapper

public SimulationWrapper(Simulation wrapped,
                         SimulationModel simModel,
                         boolean doSerialize)

Method Detail

getPotentialMasters

public PotentialMaster[] getPotentialMasters()

getAllCoordinates

public double[][][] getAllCoordinates()

Array of coordinates of all atoms in all boxes in the wrapped Simulation.

Returns:

3-dimensional array of coordinates. First index indicates the box; second index indicates the leaf atom in the box; third index indicates the coordinate (i.e., x, y, z)