Package etomica.integrator.mcmove

Interface Summary

Interface	Description
MCMoveMolecular	An interface that contains MoleculeIterator
MCMoveStepDependent

Class Summary

Class	Description
MCMove	Parent class for all elementary Monte Carlo move classes, as used by IntegratorMC class.
MCMoveAtom	Standard Monte Carlo atom-displacement trial move.
MCMoveAtomInRegion	MC move that operates only on atoms within a given region of x values.
MCMoveBox	MCMove parent class for moves that operate on a single Box.
MCMoveBoxSize	Monte Carlo move for changing the box dimensions at constant volume.
MCMoveBoxStep	MCMove parent class for moves that have a step size and operate on a single Box.
MCMoveDimer	Standard Monte Carlo atom-displacement trial move.
MCMoveDimerRotate	Standard Monte Carlo atom-displacement trial move.
MCMoveEvent
MCMoveIDBiasAction	IAction which takes data from an MCMoveOverlapListener about acceptance probabilities for insert/delete moves and uses them to update biasing of the move.
MCMoveInsertDelete	Elementary Monte Carlo move in which a molecule of a specified species is inserted into or removed from a box.
MCMoveInsertDeleteBiased	Biased MCMove for insertion and deletion.
MCMoveInsertDeleteLatticeVacancy	Looks for atoms without a full set of first nearest neighbors and attempts insertions adjacent to one of those atoms.
MCMoveInsertDeleteLatticeVacancy.AtomIteratorBruteForce
MCMoveInsertDeleteLatticeVacancy.AtomIteratorNbr
MCMoveInsertDeleteLatticeVacancy.AtomIteratorNbrCell
MCMoveInsertDeleteVacancy	Looks for atoms without a full set of first nearest neighbors and attempts insertions adjacent to one of those atoms.
MCMoveManager
MCMoveMolecule	Standard Monte Carlo molecule-displacement trial move.
MCMoveMoleculeExchange	Performs a trial that results in the exchange of a molecule from one box to another.
MCMoveMoleculeExchangeVLE
MCMoveOverlapListener
MCMoveRotate	Performs a rotation of an atom (not a molecule) that has an orientation coordinate.
MCMoveRotateMolecule3D
MCMoveSemigrand	Basic Monte Carlo move for semigrand-ensemble simulations.
MCMoveStep
MCMoveStepTracker	This Class tracks acceptance statistics for an MCMove and also manages the move's step size.
MCMoveSwapConfiguration	Basic MCMove for swapping coordinates of atoms in two boxes.
MCMoveSwapConfiguration.SwapFactory
MCMoveTorsionAceticAcid	An MC Move for cluster simulations that performs torsion moves on acetic acid.
MCMoveTracker	This class is responsible for tracking acceptance statistics for an MCMove.
MCMoveTrialCompletedEvent
MCMoveTrialFailedEvent	MC move event that indicates the move's trial failed, meaning that MCMove.doTrial() returned false.
MCMoveTrialInitiatedEvent
MCMoveVolume	Standard Monte Carlo volume-change move for simulations in the NPT ensemble.
MCMoveVolumeExchange	Elementary Monte Carlo trial that exchanges volume between two boxes.
MCMoveVolumeExchangeVLE
MCMoveWiggleAceticAcid	An MC Move for cluster simulations that "wiggles" for acetic acid.